Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT2851 chr2L 5642635–5644715 (2080 bp) CG31646, mir-964 activityactivityactivityactivityactivityactivity
active
ventral nerve cord primordium subset, ventral nerve cord subset, brain subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10brain anlage subset1
9-10ventral nerve cord anlage subset1
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset2
13-14brain subset2
15-16ventral nerve cord subset2
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0051646CG31646overlapping BDGP FlyBase
FBgn0262243mir-964435bp downstream BDGP FlyBase
FBgn0262333mir-963558bp downstream BDGP FlyBase
FBgn0262200mir-9621247bp downstream BDGP FlyBase
FBgn0262239mir-9611357bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tttgtggtttggttgtttgggtggggaaaatctaaggcggggcaggacttaaaacttagccgcctcacgccgctgctttttgtttgtgtttgctcctgtttgtcgctgacatgctcagaagcctcgacgaagtttgcacttcgcatacgctatggaataaaataataaaatgaaataaaaacaacgcacaaccctggcagacgaaggctttttctcatatgcggggcacgcatcggttaaggcaaatcaacacataacaatcttgtacttaaaatgcgtaaacaaggcgataagcaagggtgatggccaagaaagtggcggggcgaatttttttgatgtttattgatgcggccgtaaatctcaattgcggcagcaaaatgcgcaacatcgggagaagggcaacctttcgctcgtctcgtccttttgtgagtccccatcctgtcgtttattgtcgcctaatctcttcctaaacatcacgtttcgagttgtcaacgatacacttattgctttcgggtaaaaggcatttgggagtcgtttcgatcgtggaattcaaggatcgcatagttgcttgggtatcatttcgaaaagtaaaattggtatctagtatcttggtatctatctgttaagtgcaactaacacaaaaagaagggcttattgagatattcatgattttgagcggttattagtataaacaaaaaggagcgtctttatttgagcaatatcagcatgtagtttagtactaaaatagaacacttacaattgttgtaactctatccactcccagcggattttatctgtagagcttttctaagcattcatcttgtatctgccgtgcacctcacttgataataataatgaaaccaagcccgaacaactggaggataccactaataagctcgataacacaggcttcaattcgtcagagccgaagcagtaggtccttgttgtgggccccttccgcaaactgttttgtcatcgtctgccgccttttgccaactcatttgatttgcctccgcttattgatacatccaggcagcaaggatatgcctgcgtgagtgggggcttttatggcatacttttctggaggcggtcgtgtgtgaatatgtggaaatttgttacatattttgcgcttcgtcttcgggattgaaagtgtgattgtttagtggatttatgggcatatgaaattaggatttaatgggcatttgctttgtatctgaagtggataaatgccacgggaaccctcggatccatggctctgagtgcttagcataatgtttatgatgtatgaaaggaaattgtaaatcgccgtttagggcatgttctttggaggctttgtgccctgaataaaaactcggcttaagggattcccccacaaacccaaccacattcttattcttgtaaagcatttagctcgatgggtacagcatagaaaacattgggcatcatatgcagttggaatttcagtttcctagctcattgagacgctcgcttgatattataaaatactttgacttagttaccagtgcctaatggagcactttctcaagctcactaggcacaatttcccactttccttccgctgctttaagccaactttattaagtcaagtcgacttgactggcatttcaacttaataagcgcaacggcaacatccagaggcagaagaggcaacaacaagtaaatggcgctatttaaatgctaaacaactctattaacttgcacgacacactaacacactcgcatgagatgtgtttgagatatacccacacatacgcgcatgcaggccgcctcactttctcgcatatcccatatcctgcatacataccatatccatgccaagggcaagcctgacatttgtccgccgtctctctgctgagaaaactgaacctcagcacgtttcaaatacaatttacaataaataaaatttaaaagcgagagaaagactgctacagcagccaagcaactcgtattccgagacactcgagggtgggcgaaaagcgggcaggcggaaaagcgcggggaaaagcaactgacttaatggcgccgttttaaggaaaagcagagggcggggaatgcttgat

PCR verification status

Line verified as correct.

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