Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT7080 chr2L 13888151–13890290 (2139 bp) CenG1A, Smg5 activityactivityactivityactivityactivityactivity
active
posterior midgut anlage, antenno-maxillary-labial complex, ventral epidermis primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8posterior endoderm anlage2
7-8procephalic ectoderm anlage2
9-10ventral ectoderm anlage1
9-10posterior midgut anlage3
11-12antenno-maxillary-labial complex3
11-12ventral epidermis primordium subset3
11-12head epidermis dorsal primordium subset3
13-14antenno-maxillary-labial complex3
13-14head epidermis ventral subset3
13-14head subset2
13-14ventral epidermis subset2
13-14lymph gland3
15-16antenno-maxillary-labial complex3
15-16ventral epidermis subset1
15-16ubiquitous3
15-16brain subset1
15-16lymph gland2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0028509CenG1Aoverlapping BDGP FlyBase
FBgn0019890Smg510677bp upstream BDGP FlyBase
FBgn0012037Ance17494bp upstream BDGP FlyBase
FBgn0032535Ance-221182bp upstream BDGP FlyBase
FBgn0266142CR4484821462bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tggaatcgaaatcggaatcggagaaggaaaacccaattcttgtgcaggctactttttgctggtttgctgccagcaactttgccaccagtcgccgtgatcttctttcaccgatctctgggcaaatacaaacggcgttcgggacaaaaagaaagtaaatctggtttttggagcagatgtgcagaatgcacagaatggacggaagactatgaaagcaacgccaacaccgagaaggaaattgagggagatatatgtacataggtgaatctgaagtcggggatcatgagatttattgccagatctttgggactggacactgtcgtcggggtcagcctacctaaatattttcgtaggtttttcgtgggccaatgcaaataggcatccatacgcatccatgggatgcgtatcccaaagatctccaacgcgattcataattccatgaaaggcgaggcaaatgggaaaatattctattattatggttatggcttattaaaatcacattatttgaccatttacgggcatggccaatgtatcaaaacattcgtggcgtttttcaatggcacgaacggtttcgccatttgtggcacctacaataattagcctaaattgaggctcgtcggcattaaactcaatgatggatgtggcagctggttaaagctgtttattcagtttttaaggctatatatatatgctatgattacgtgagacctatttgatgttattatcaattttcttgtggttttatggcttgcacgccattcaccggtatccttcagctgtatttgagtaaaggacagtcgtaaaatcatatatgcgatgacagttctaaccgcttcttgttgtggctaccgtaaacaactaaatggttataaacaattttacgactttttcgctgacaatccttggcgcctcctggacaaatagaattgaggtatatacatttatgcttctcttggatgcctggcacgcttcttggtgataaaactcagtccggttgttcggttcggttttagtttgaatacagctgctgtcagtcataaaactaagctatctatatctttaagtttggggtcagaaggtcggtcagctgtttgttgggaaaacatgcttcccaaaaagggatatgaatatttcatattgttcgctaattaaaatgcttaacccacatcaagagctgtaaatcccaagccttcttatcgcctcaatggcaaaagtgtacaaacacaaacaaacaaagctaaaaaaaaaataaaggcaaaacaaatcccagccgaagtgaaaaaccccttcgatcaacaaacacggacactttctcctccccagaacaagaaatgcaaatggaaatggaaaaacggaaaactcggaaatcgaatgaacgtcttttgggttccagctagtttgcatacgtaattgttttttttttttttgggagttttgacaacgaaggcgacatttgacatgagtttgagttacgatcccgttgagataaagatgcagcaatcacggagggatagtggttacaagtaagaaagggttgccctgggccagcggtttgaacttcacacataagccgatcgtcaaacccaattccgattccgttcccgatcccgattccctcaggtgatagttaacccccagttcggtgtcagacatttgacatcattagtcaaacttaaagacgcatttgtaactggcttgtaactctaagcgctttagcctaatgacgagccattaattagacgggatcgtctgtggtgcacagcccctgcaatttgttacaattcgagcaatgagaaccgcgagaaaccagtcgccagaacgccatctttgatccaaaacccatttccattattctcaacgatgaaaaaaaaaaaaagtgaaaaaggcatgcaaattgcaaaaccgcgctaattttacccagccatatcgctttcaattggactcgacaatatcttgcccggatttatttcggtgtttccagtattatataacaaaaggcatatttatttcgttttaatttgtaattttgcgctctggtcagcgaggcaggagtgcaaaccagttgaacttgtcttgtccatcgcctcagtcgattaacgagcggcaggaaaacaagttcccatacaaaacccttgagacgacg

PCR verification status

Line verified as correct.

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