Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT16238 chr2R 9465978–9468385 (2407 bp) CR44366, CR44365 activityactivityactivityactivityactivityactivity
active
anterior endoderm AISN, head mesoderm AISN, head mesoderm anlage VDRC

Annotations

stageannotation termintensity
4-6anterior endoderm AISN4
4-6head mesoderm AISN4
7-8head mesoderm anlage4
9-10head mesoderm anlage2
9-10trunk mesoderm anlage1
11-12yolk2
11-12hemocyte2
11-12plasmatocytes anlage2
13-14yolk2
13-14hemocyte2
13-14macrophage2
15-16ventral midline3
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265497CR44366overlapping BDGP FlyBase
FBgn0265496CR44365929bp downstream BDGP FlyBase
FBgn0027581CG61911840bp upstream BDGP FlyBase
FBgn0261990CG428084217bp downstream BDGP FlyBase
FBgn0261989CG428075934bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

caagcaaaacacaaaacacaaaatcttcaaaatcctagatctaaatatttatttgaactacgttttgttctcagtgcatgtttgttcttaataaatgagctagagttgctgcaaaactttctgtcgctctggtttggcacgtttgcctttgttgctggcttctggcttccgccgtcagacggtcgtgcgtgctaatgagtaataaaccagcattgttgttgccgggggtggggttgagccagccgtatcaacaccgccacccccatccccacccctgccacacccggtggcctagacaagcggtagacttgaatgtcaggcgaacagacccatcgagcagcattcgctgtcccaaaagagagaatgcgaaaccggggtggggtgggtggatgatgggttggttgggttgggttgggttggatgggtggctgggtgtagtgtcagttgctggggatggtatctgtgtggatgccctctgttccgcctcggctttcgcgttaattagttttgagcgctttcattatgcagcttcatgtggcaggcggacgtggcgcatggacttttgttcggtgagtgtgaggggggcgagggggagtacaggatacgccatgtccatgtccatgtctctgctccggagcgattccatctttcgccatttcgctaatgagctttttagctgactaaccaatttggcgtaattacatttttctgatgctcagattactttttaatggtatttctcgaaatgcagctgtcagctacatggaatttaaatttaaaaaaactgctcgttgaatgtatctttacactgaaacaaatacttttttaacttttgagaaataataaatatatatgtatatatggtatgtataacaaatattttacagggaataaggaaacatatcaaggaaatgtattactttcaagacatttcttagcttctataacatatatacacatacaaaataatgacatatgtatgtacatatgtacatatgtataaaaaaataaaaaaaaattacagaaccgtttgttttattagtaaatgccatcattgggaattgcattaaagagtaagtgcatggtggaaatcagagtgagtaaacctcatatgcagggtatttcccagtctcaattgagaaaccccagaatcgaaaaccatattgctgataaggcaaaaagctaagtgcgattgcattgcgttacatgcggcagccacctctgcccatttgctggccgcccgaatggcagccagctacaaaaacattgtggcttatcacaaaagagttaacagacactacaacaacaagcgaattgaacaaaaggcgatgtgcaggcacgtatgtacaccccccgcagagccgactaccccactcccctctccaacaccacactaccaataccctgccagcacgtttgagttgcccgtatttttgggttatcgcccggtcgtatttgtttatagagaaagagagaatttttttttttgtcttttttgacctgaccacctgttgctgggcgctgagcgcctgttgcgctagcaaataatcgatcgtcagttatttattgatttctgattgatgggccaaccaagtcccatccaatttgaatccaaacgacgtggcttaagggcgggggattagcgtctgctacgtgggatcttcgtgtgtgccggggcggattagctggctttggtcatgcggctaacagaaaaacggcagcaggcagagatcgcgtcgccagtggaaatttgaataaaattaacattacaactacagtagtcggcggcacagaatgctgataagcgcttaacttatcaaatgcatacataagtggttttcgtttggttaactttagtttattcatttttgaaatgtctataacagaaacccaagaaaacatatttaaacataaacacttaggagtctaggaatcagggacgaaggtaattttgggatatactcgtatatgtaaattgttttttttctaagttttttaatttgttttgtttttttttttgtagttttgtgactgttttagcaaaacttatttagctacgccctaagcctaggcaatattatcaatttttttttttttttttttttttttttttattttacgatgatgtttttattatttgatcaacgcactgttacccatgcggcaacttaatttgatctgcttaaattattttattttacaatgtgtcttggttacttaagactaacagatttttaatcctaaaaatgatagggagaattataatagttgatataacatagtaattattatttatttgattattctaatgaattttaaaactaagactttctaggtcaaaaccaggttagggaggtcatgagggtggtgaatattatcaatacgatcgttgaaaacccaacacccga

PCR verification status

Line verified as correct.

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