Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT19067 chr2R 14985277–14987381 (2104 bp) 5-HT1A, Ir56a activityactivityactivityactivityactivityactivity
active
head subset, ventral epidermis subset, pharynx VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14not active0
15-16head subset3
15-16ventral epidermis subset3
15-16pharynx3
15-16telson subset3
15-16dorsal epidermis subset3
15-16esophagus3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn00041685-HT1Aoverlapping BDGP FlyBase iFly
FBgn0050125Ir56a1599bp downstream BDGP FlyBase
FBgn0034417CG1511724459bp upstream BDGP FlyBase
FBgn0027535botv31817bp upstream BDGP FlyBase
FBgn0034418CG1511835955bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

atgcaagtcgctttctttgccgctgaaacgtggcgtatacgcaacacgcggggagcagctcattaaaatcgaaccgctcacatgcggagaaaaactgcgttcacagtttgaagattaatttcaatttgattaatgttttgttattaaatgatacacttaaaaaatatattttcttaacaataaatattaccaagccagaataatttataaaatacgcataatatctctcagatttctctctgtgcaaaagagcaaagagaagaattgatatttgtttttgtcactaattaatgcattcaaatgctacgaaatggctgcaccgcatttgtgaaattcgtttcgcaaccgccgaacggcgcattaaattgaacttccacacaatgtgcttttgaaaactattcctttgaaaggagtttgcaccggtggtcagaagtgggcaaaaataaatccgaaaaaagcacgctgataccctgtgatgtggctgtcaattggcaaattgaagcgatggcgccgcaaattgcctgtcaataaacaaagccaagtgatgcttagatttcgcatgcatatcaatcagccaaagacccggttttaacattacgacataggggaaccgccctatctttggcacctcgcaaacgccactcgcctgtcagctggacaccgaaaagaaagcccaagtcccacttcatattatgattgtatagcagcgtatttcgtatttatggagtggggcattggggcaataccacttccatttctgctggcaagtatgcaaatgacgaggcatgacagccagtgatgatgatttgcccgagtgccacatcatcgtcaagataaaaggccgccggctcaggtccagactttttggggctcaagttgagtcgaatggcataaggagtgggggaaacaattaccccgagagggctttggggcacattttatttgttagttgtcactagatatttaaaatggaaagtctttgttttatcaccaaatgaaatgaaaattaatgtgcttttaagcaaggcagaaggcatttacagcatgacgaaacgagatgggagtggtgcattaataaattaagtttgtcaaatggtccccgaactcagctcacccaaactggatgataaatagttgccgacattcgactacaataatatttgcaagtatttgccattaggacagccaaatctttgacaatacgatgctgggacatttacgagggggaaatgaaggtagtggttaacattttccgagttcattttccatgtcagtaatttttaagcaattaagacaaagtgccaacagtatttgctgaagccgtagattcgaggggttcacacagagggcaaccggcatataaaaaagaaacacgaagccgtggaacaagtgaactgagcagcagcgccagagaatttttcgtttgctatttgccagcacaataaagcctctacacgggaaaaacgagggaactttcgattaaataattaaaaattttatacttttgagcaagaataaccggcgcatacaaacctgagtgtgcccagactggcctacagaacgaatgtgaccgtgccacaaataaaaagttaaaaattagtacattttaaaaggaattggtatacacaatataataaatgtagaccgcgagttgctcaaatttttccttgtgtaataaaagaaaccaaaaattgggattccgcaccgacaaatagcgcctggacattaatcttcatggcactgacccaacgttttggccgattctgtcgaatgccgttggccctcggaatatatgcacatatagaacagtctctcttacacatacactcatacactggagctcgatgtgcataaatttcatggtctgcatgctgctgacgtcattattagtggcagcacacgaaaccaacaacaaaagcaaaggccggccgaaccgaatgataaatgcctcgcggctttgcgttccacgctgccttggtcgaaagcatttaaatgccaagttttcgcaaaggccccccccgaaatatgccctccatcttgctgccctcacccttcggaagccgagatcatgggactatatcctgattgctgactgctaaccgcat

PCR verification status

Line verified as correct.

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