Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT23832 chr3L 1090039–1092178 (2139 bp) bab1, bab2 activityactivityactivityactivityactivityactivity
active
hindgut proper primordium, anal pad, posterior spiracle VDRC

Annotations

stageannotation termintensity
4-6posterior endoderm AISN2
7-8not active0
9-10not active0
11-12ventral epidermis primordium subset1
11-12hindgut proper primordium3
13-14yolk2
13-14anal pad2
13-14posterior spiracle2
13-14posterior ventral nerve cord subset2
15-16head subset2
15-16anal pad3
15-16posterior spiracle3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004870bab1overlapping BDGP FlyBase iFly
FBgn0025525bab250390bp upstream BDGP FlyBase
FBgn0035181CG920553742bp downstream BDGP FlyBase
FBgn0024277trio55165bp downstream BDGP FlyBase iFly
FBgn0035179CG1203894337bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gcgacttgcacgcaattaagccaaactgcagtcagtcgttgcaagatgaagaaattcatttgtatgtacatatatatttaaatgcagtgcaattgtttacattccgggccagggttcaatgcccaacttgagtttacagcgcttaaaattattgtttatattaatataaatggttgtggcaaaaccacacacactcacacacacacacgcgcgcgatgtgtgtcgggagcaaatataagcgcaataatacaaaaaattattccattcatcgtcataaacttcaattttcgaaaatcatttccttagcagctgcgcattaaaaaaaaaaacacagaaagcagaaaaataaagaacgccaacaataaaaatgaataaaatgaattaaggctgcgcacagtgggcatgatttgcacaactcgccagcaaatcgagatatcgcaaatcaaatatacctcacctgcccaaagtcatttgttcgtgagtagtgagctgctgattgatgtccgatgtccaagcaaagcgcaagttgggcaaatatgtcggagctgctagtccgggaaaatgggggcaaacaaatgttgtcactagtggtcaccagctttggtggccggagattagtcaggtgtggggaagttggggaagaaacccatcgactttcatcactctactaagtcgaagtatctataggagaaactctactatagtaactacaagataacacttgtacttagctgactgttcatttggtaaaggggtatatgatagtcggcacatagatagtttttggattttatatccaattttcgtctcgttgagcccactgtggccagcttgctcagtttttgccctttgcacatcgttaaggaatattataaattactacagcaacagcaacaacaaccgcaacagcagctacaatgccaagaacaacggcaacggaaagtcgagttccttgaaatatttattttatattacgctcttcgttttcgttatatttttatttttatttttattccccttttctctcactcactcactcactcactacttcacttaactttccaaagggccaaagggaggggtcgcggtctaaattaaagaatatttctttgccgtcgtcttgagttcgctgccgcttaccattttttattttattcacatcttctgttttttgttattttatttattatatgtatttgccgtggctgcagccccgtcttcgcttaaagtgcggttccttgtccctctccatatatattcattattatggccgtggcggcgacgctgctacacataacttcaactttgtatccgtatctgggtatcttcgtatctttgtatctgcgccgtggcgagtgtgtgtgtgcggcgtgtatttaaggcaaagaatgatgcgaagacgataaaatataatttcggctttatattttattttaatgatgaaaaatgttgaaactttattacgaactcataaaaaatttaaacgtaggtacacacgcacacacaaaagcctggcgagcggggtagaggttataacttcttctcggtttcttcgacgtcgtcttctgcttctcactgcttctcattgcttctctgccctcataaataacaaacccaaatgctctgcgaacactgttaaatgatataaaaatccgaagcgcatttacttttattgcacaatgcagccgtggatttcggatttcggattttgtggcaggggcttaaagtatctgtatctcggcgatacagcagtaattaaagaaagcgcactaggtgtgaaaatacatgtcataagatacaaatgtatctaattgaatgaaagcgacgtagcgagcgatttgctcataacacgcagccgcaactcacttcccccattaaccaccccccctccccaccaatcaccaccccaaccccgcactgccccaccccccgctgttagtagagcgtgcgaatgaatatgattcgcatctcggtgtccgcactgtgtgaatgtattgtaaatgtgaatgtgaatataaatgtgagtgcgagcgaagcgtgcggccaacgcatcaaagtcaaagtcgacggcgatgcaagttttgatttcctcgatttcggtggatttctatggataacggagtccatctgctagctaaca

PCR verification status

Line verified as correct.

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