Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT29360 chr3L 11850588–11852712 (2124 bp) CG44837, CG12521 activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, brain primordium subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12brain primordium subset3
11-12ventral nerve cord primordium subset3
13-14ventral nerve cord subset2
13-14brain subset3
15-16ventral nerve cord subset1
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266100CG44837overlapping BDGP FlyBase
FBgn0040816CG125219686bp downstream BDGP FlyBase
FBgn0036217CG590612969bp upstream BDGP FlyBase
FBgn0262366CG4306420768bp downstream BDGP FlyBase
FBgn0036218CG1412821627bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgcacaaaaggaggggaatggaggcgcaaggaggcggctgcaggaccaacgtcaacaaggacaataacaatgaaaacggcaacgggcgaaaaatagaaacgggagcagggaaaaaaaagaaaactgttacggaatgctttatagtttccgccattattttcccttttgcagctgcagtttttagtagaatctctctacgatatatacagtgtatatatgtgtgtgttttttgtgagcaacacccggaccgaaagaaatttagtccgagactaaaaacaactaaaatctgtgccgcatgtgcaacagccaaaggggctttcgcaatgggcggtggacaggaagcgctctttgctgtatgctgaaaagtatttgtcatgccatatctcatcccagccatggggcatatatcatgttatacgcggcactcgtgggaaacaaagcgaatccattccataaataatcccccagtggcaccacggtgaaattttttcgggggaataggaaaatggagttaggtgcgagtgccaaaatattcgcactttctagtagcactcagggaaaaacaagaagtggaatgttgaattgctggaataacttaactcctttggcttataaaaagctaaatatgctgctttcctaagcttctgtcaattttattctaattttagtttgttagctttaacaggaatactctaagcttactttactttcagttccttctatgagccaagttaatttaagtttatggttattttgctctgctgttttctgtcatgctgcgatgttttggggattttttggcgcaagacaacttttctgtggacccaaaagtttcgcagacaatgcaataaacttcgccatatcaatttatcgggcttgattatgattgattcggccatgaagcgaacgtaatgtacaaagaatttgcggtcaactttatcaattcgcccttctttgtacagcggatgcgatggagctgttcggtcaccatctacggagtacggagtccggattctggattccggaacccaaggaccccggagagtgcgcagcaggcatgtcgacagtccagagttgtcgactgcgctcctagccagctgctgtttttagtttttcaaatgtcatttggccatttcacgctgatggacatcagtctctgtagcccaccctctcgtcgctccacacgccacaaaattgccttgtggctgccacgtaatttctgccttccgtactgaggttgccccggcaacagccccacattcaaatgttgcagtcctggaaggcgtgcaacccaaaccaaacccaaacacaatcgaaaagtacactaggaaaaagggaagtcactaatataatatgtcataataatagctgcaaaaagagtggctgcggtggtcaatattcgtggacgatattaaagctgtttacaaattattttgaaaagtagctaagatcaaaaaacataatttgtgaaaataaaaaccacaacttagtagacattattattgatttaaacgaattacaactgcctttacaactggttttttcgttcagtgctggcccaggagattggcccgaaggacagcagactgttggcctttggcgttagccacaatggctgtggtaggtcctcgcattttgtttgtttattctgccgtcccattgcgacttatgtgggcgatgaccggcgaatgtccgcaccccagtctcacccactttccatccgcatgtccttgggaagatgtgtttgttttgtgccatcggaatcgaaaacgttctaagtgttcattaaacaatttaaagttgattggccctggctggccgacacagtaatgcaggaatgtgtgtgtgtgtgtgtgctgaatgtcacaatggatttggccttaaatgtaatttggctgctgattgcgttaagcggctgagcactttcctaattgtaatgcattgtggctgaacgaactaatgccttatcggatacagattgatgtaatcagcgtaatcagcaaatggagttatcattcgaaggataaaggtaccgcgagttatgaaagttgtgcgaggtactaaatcagcaaagtatcttcttgcatgatgactaccttcaaaattaacaaaggaaatggttgtg

PCR verification status

Line verified as correct.

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