Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT30323 chr3L 13683161–13685417 (2256 bp) bru-3, mir-289 activityactivityactivityactivityactivityactivity
active
ventral nerve cord primordium subset, ventral nerve cord subset, brain subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset2
13-14brain subset1
15-16ventral nerve cord subset1
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264001bru-3overlapping BDGP FlyBase
FBgn0262415mir-28969142bp downstream BDGP FlyBase
FBgn0262813CG43184147695bp upstream BDGP FlyBase
FBgn0036380CG8757150136bp upstream BDGP FlyBase
FBgn0040812CG8750152505bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ccacttaaagcggcatatatgaagataggaggaacttcactatttgaatgaaaataacttttttagtgctgtcagtttcggtggagagagaaaaaagaagttcatatctttacaaatgcacaacttcgaaattaggcgtttacgagaaatctaatttccttggctctggaaagtgccttcgtcatttgacaacaaaagcaggcatcaaaagatggattggccaatttggttttcgcagtgtttaccctgtagctggcatggccttcacaccggccacggggcaactttcggatgcgggtttttctaacgtagcccactcccaagctcctcctgaccagaaaggaggaaatgagctcctgctgctgatgcatttcccatggaccgaatgcaaccttcgcctggtaataacaaaccaaacactgcataaattcaggcatcgagtctggctagcctctccgcccccagaaacggtgagctcttcgttttcgctttggtatttggtcaagactgtctgtttgtatttggatttggcttgtttcgccaactgccaacagggcccaagcccaaaacccaacccacccaacccaaaccagatcccgatcccgagcccaacagccaaatagcagccgaactgcagcgcctattgttcggcaatggcttttgttttgttaatttgctcggtccaacaacacagccagccgcctgggcaactttcatggaatgcgctttgcttaggattgacttggattattcgactggcagacgtggatgtgggatgttggatttggggcgtgggaactgggtagtggtaaatggaaagtgggggcaccggcagataactaagctactatcgaaaaatggacactctcgatagcaggaagggtccgaatctgagggcttaaatggctgcaccatgcacagtatctaaagtccccagaaagttattcaccgaagagtgtagtggtaactgctccccaatcacccaattgcaggactctaatcccagttgttgcgccttagacccatttgaggctgcagggcgtagttaaaccaattttaattacatgcatgctgcacgctggagttctggaccttatcagcaccacaaaaattaatgccaagctaattgaatatgaaaagagcagactaccgactaccccataccgaagactaagtccctgggacgacaatacgacaaagtgcctggggggatctgggccagaatataagcattccgggctgtcactaatggaaaaagcatcaatggcttatggattccagtttttcgaatggcaatggcaaaaaatttatggatttcattctctattcctcgcattttcctccatcttcctcgggggaaggaggccacctgtcgtttggcgtatttgcagatattcgcagcacccggcagaataaacaaatggctaagattacacggcaactgctagtatggcctggcatggcctggcctatgatttcaaggcgatggcagagtgcgttttaaactgacgcccatgacgcaaacaataaccttataaaccaactccccctgcccctttcgacaactaccattccctgtgggcgtgggtgtgggtggtgtggacgggagtgggcgtggtgctgtatacacaaataaacattcaagtggaattattgcaacgaaattcaaaggattacgacaaaagcacgttcacaggattcagcagcaactacggactccagtgcaaggcacggcccacggatcggcaacggactctccgggtcgccaatgacaacaatgcgggcctcgtggagcggcaggaggagcagctggagcagcagtagcatgatgaagcgttgccgtgaggtggagcgggtcaggggtcatggtgtgcagagccggagggcgagtgtggttcggcaagttcaatgaaggaaaattatgaagccttatttattgtttatgcgtgcgcatagctcatggagagcatttcaaaccgggagcaagtggaagtggaaggacttgtaatttttgtccggcaatatactggaaaggcaaaaatggattaatacgctagatgattggctttaaggtcatcacttctataaattcttatcgaaaaatatttgagggtttaatgcaatttagtgatacatgtaaggtcccttatatctctaaaatcccttgataataataaaaatgttttttctttccgcatagtttaagggtattccgagaatcactatcaaggacatccgacttctttctgcgaccagc

PCR verification status

Line verified as correct.

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