Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT38543 chr3R 4511441–4513684 (2243 bp) CR44937, CG44227 activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad, head subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head subset3
9-10ventral nerve cord anlage subset3
9-10hindgut anlage3
11-12brain primordium subset3
11-12ventral nerve cord primordium subset3
13-14brain broad4
13-14ventral nerve cord broad4
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266242CR44937overlapping BDGP FlyBase
FBgn0265158CG44227544bp downstream BDGP FlyBase
FBgn0001180hb5261bp upstream BDGP FlyBase iFly
FBgn0053325CG333255686bp downstream BDGP FlyBase
FBgn0037611CG117556765bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ggaaatcagttcccctctttttccaaaaagcaaaacgacatcctttttgtcagccacaatgaccagctgaaaaatgcaagtaaacccttggcaaatcgaagcagtaattttgcctcttcactttgccaaatatgtagcagtcgcacacatcgaaaattattgatggatgtcagttgagcacctgcagggagaaagggggaaataaagtgggggggagggcagctgaaaaacgagagtgaatcatgcaattgccagatgtccttaatcgaggacacaagccaactaggcggagggaggactctggcctgtctagaacttgattcctcggtggacaagtaacggaaactcgagacccatatccgcccatctagcatccaagtgctgacaacttgcatcgggagtatcgtttagcacctgtagaccgttgatactcacccatccttcgtccttcgtcctgatactgatacatcatcctcggggtctcctaattgctcacattacactccatctctccacagctgacatttgcacttcgaattcggcacaaaggaccaataagtcgatttagcgaaaccaaatacagacgattcccagattccaaatcttttcaaagggcacaaaacaaacacatgttgctaaaaaagtatctcttacaaaaagaatagtaggaaaaccttgccttacctgttttttattcacatgtcgagttcatccctcaacctccttcccataaagaaaaaaaaagaatatcgatccattgaaactatttgccaaatggttctttccattttagttttctattcggttcctctttttttttttttgcaaccctctatgaggtggtggtggtttgctatccgtacccaccccgtattccaatatcgggtagtttggatttcgattttttgttttttgctcgtttttgaggagtgtttttttgtgtgtgatatttttattggtggtaatcgcattttttgcgtgaaatttcctctattcggattgtgtaataggcgttgctttgactttttggccacgatttgattggttttgatggctcgattagggaggattaccatcgctttcaaggggaaaattttcaataaaaaattgcatatagggtctacgtcgaatgcatatgagctatcttatataatttgttctttttttctttttgccgttcttattatggagttaatacagaataagagagccttcatatattgtatgttttgattgagtcagtcatttaataattagtattatcagacgctataactaatatcaattagagtctgccccctgattgaatctttcactttacccttccagaatttgggactctcccaggcatctatgatttcactgttctcttgaccatggcatctggtggatgtgtttcgagagcaaacagaaagtaaaggatgccaaaatcgggaattcaatcgactggcccgcaccaaaagtggcattgtttgtagcaaactgaccaaacgagtccagcggctggactttctatagtgcaaatatggtatgtggcggcagggtgcaggactcctaggacacgcgtagagtatctgtgcaacccccacactcacacacacactcacacacattcatagccagtgaggcacacgctgttgtcaacttccttcttttttcggtctcctcataacggatgctggacattatcgatgaagtggaatgggagtggaaatgaaactctggatggtatttcgtatttggtatagagcattgggtagccggagtccgcttgcatatatttttaaccttttgttgtttttcgttaactaaagtgccatcaggggcagatgtttttttccatcccagtcggagtttttctcccatatatatctcctcgtgtttttttttgtttttgtttttgttacccatccatttacatgcggagtggacacgatggacgcattttgtttgccgaactgtaaaaattgttttgttactttcgctgtttgctgtcgcgagttttccttagttatccgctttgtttatttccctatggaacggtggggtccttcatggatctctttcatggtatctattcagtgtataggataaaccccaccaccaccactaccatcaacatcattattatcttatagatgtgctttaattttctacagttttgcatattcatcaagcaattagttttggtttttgcctttgaattgcagttggaattttgtggctgagtggaattgttgtcga

PCR verification status

Line verified as correct.

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