Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT39463 chr3R 6274780–6276933 (2153 bp) CR44939, Cyp12e1 activityactivityactivityactivityactivityactivity
active
anterior ventral nerve cord subset, ventral nerve cord subset, anterior ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset1
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset3
13-14brain subset2
13-14anterior ventral nerve cord subset4
15-16ventral nerve cord subset2
15-16brain subset1
15-16anterior ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266244CR4493911970bp upstream BDGP FlyBase
FBgn0037817Cyp12e112355bp downstream BDGP FlyBase
FBgn0266260CR4495513329bp upstream BDGP FlyBase
FBgn0037816CG634533013bp downstream BDGP FlyBase
FBgn0037815Rrp4634817bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgccatgctgtattgttgcagagagaaaaacaatcactcaacttaaaactatttataaattttgcatttaatttgactaaatctatttattaacctttgttgtattacagtcgttaggtttggctactcttttaaattcctcttcctatttctttccaagtgaatttattctttttatatggatttgtatttctttaagtgtacttccgctgctgtttggcacttttgcaccccaaggggccaagcgggatgggaacggtcaaatgagcagtcgctagttggcaatcggcagtcgggcagcttatggcatgttgtgcgacgttatcagcgggagcggtaccgggattgggattggcatcggcatcagcaccagaagccggcaagggagcggtagtggaaacaggacacggagcagcagcggcaggagtcacccctgcgcgtgtgttaatcagcgtaatggtgccattccccggaccatttccaatccacagcgcatcgctgtcccaatcccaatcccaatgagaatgctcacatgcggagccagctgctggtggtctccgtaagctggccacgatgccttcaacttgggctcaacttgcgcattattagcagccagcggagtatcctttgtgtccttgctggtgagcactattagtgcgtctttcgctcgctggctgtgtctgtctgtcactggatttattgcaatcattaatcttcttttctggacccccgaccacccatccaaccgccacctcgccatgtcctgtgctgcagttttaccccatccattcagcaaggacctccttccattccgaattctttcttgcgagtaagattttattaaatttttgttgctactgctttgattttattaatttggcctttggtgcgtggaatagttaagtaactattttcttgcactgtggaaaaaaaacgggtcttagtagaaccactttttgtttaatataaagttgttagggggaaaataatataagaccaacatagttagtttaagcacttcaatcacaatataaagaaaggtaaatgtacttttttcttacttagccctaatgattatgattatgttttttaggcacatttaaaatttttttggaattttttatagtgcaccaagtctggtttctcagcctgattgacgtctgccagagactcgcaatgttgccagtttttggcttataattgctcggcacttgatggtatccgaagagggggaggtggtggttcggtggtagaaagtggttgggttgcaacggggaaggggtaaggtggggttgcggcaggggctcgaagaagggcaaccagtgtctggtcattaatcatggcgatgttgcaacaaccgaaagcgtcgttcgggggttcgcttctaatgcaaaatgcagtcgtcgctggcattcgcagactgggcgactttaattgctttcagggagttgctcttcctattttccatttcccaggggggaaaacgaaaagtcctggccgcagctctggcagccattttacctatatttgtaaacaaattaaatgcatttttttgtttgctatcctcatttaatgaaacattgttatactttttgtttcctagcagaacagtgacttttgcgcttgataatctcataagagtgatttatcttaatatggctgaatgaaggaaataactatttaaatgttatactttttaggcttaagtcccgaattattggaaattttgtttatcgagctgtgacattttactttttgatttcaatttggtttttacattttacattgtaataattgtcgaaatcaacatttgtaattagttaataatataaattgtttatttaataactacattatacatttaaatggtttatatcgacatgtacttttatatttccatctactatttatattacaaaattaaactctaatactactggtgaatgctaatgccgccaatgataaaattgttgaatgttttttggccataaagttaatgcacgggttaaatctcacctcaaatgcagttggagcccgtgataagttcgtacctcccgcagagatggccaggttcgatttggagtatcgcgggcggtttaaacgggtttaacccaatggcatttcggcggggggaggggaccacagttatttatt

PCR verification status

Line verified as correct.

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