Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT42790 chr3R 12635558–12637851 (2293 bp) abd-A, Glut3 activityactivityactivityactivityactivityactivity
active
posterior, A-P semi-stripe dorsal, ventral ectoderm anlage VDRC

Annotations

stageannotation termintensity
4-6posterior4
4-6A-P semi-stripe dorsal4
7-8ventral ectoderm anlage4
7-8posterior4
9-10lateral epidermis anlage subset3
9-10amnioserosa anlage3
11-12not active0
13-14anterior ventral nerve cord broad2
15-16ventral nerve cord broad2
15-16anterior ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0000014abd-Aoverlapping BDGP FlyBase iFly
FBgn0015230Glut319816bp downstream BDGP FlyBase
FBgn0264857iab-821280bp upstream BDGP FlyBase
FBgn0266250CR4494525165bp downstream BDGP FlyBase
FBgn0020556bxd36648bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

tgagatcgttttgacctaccaccgagtggtgcaagtggcctggattgtgtgcgatgatcgagtggtggtcctgcggctgttgttgctgctgttggtgctgttgctgctgctgctgttgctgctgctgttgctgttgctgctgctgttgcacttgcttgttctgctgggcggatttcatcgtctcctgggccttcattttctcctgctcctctcgatcgcgtcgcgccttaaaggtaaattaaaaacggaaagcaagttagttaagagtttaaggtgctgcggaaggaccagctcacctgttcatttatttccttgacggctcgtaactccttcttcagcttcatgcgacggttctgaaaccagatcttgatctgtcgctcggtcaggcagagggcatgtgcgatctcgatgcgccttcgccgagttaagtagtggttgaagtgaaactccttctccagttcgagggtctggaagcgagtgtaggtctggcgaccgcgccttcgtggacagccgttggggcctgcggaggagaaaacggagaaagttgcgtcagatgtttgcaacgatgtttaagaagatgtttttgcctttttcggcaacgcctaatgagctgctaagacggtgtcagacggtcgaaaatggtactttggccagctgcaacacatgtcaggcgtcgacacatgatttgtgctggggtatgggggtttggaggttgggggcgtacatttctgagctgcactgcgaatgtctgactgcaaattacgggaaaaacaaacagattgttttaacagagagagagagagaagggagtgatctgatgctagagctgacgtcagcagccggcgccccaggacgtcaacaccccggggtccattgcggacctgattcaactgcggattggcatcgcacgcagtgcgtgaaagggtgaagctaccaataccgacaccgactcgcccagcggcaggtctcgccctggtggccagcagccagcgcttttccccgattttccccgcattcctttctctactttcttgtctagttttttgtttcttatttttagcaattttccatgctacctgtgcgaattttttgcgcgacggtgtgcggagatgcgctcggaatggcacaggctccgtgtttatgttacggaaatcaaaaattcgctatctacaaattgctgtcccagtcccagcctaacagcctctcacttatacccgcttgccgttttatggctttcatgtctcttcttttttgcactgctgcctttgtgccgagttttctggcaaaaggttttcatgtcaacggcaattttttatggtttgcaagttgcgactttccaacggtaactgttcaagcagacaaaataaaaaagggacaatttttacgtaatattatgaaaggtgcagaattgtatatgttgctcggctgcagttgtaaatcattgtgattttttctagtttccgctgcattttttatgagactgaacagttggcaaaatatttacgggcgaataaggccgtgacatttgaatttacctcaaccgataagaagtattggtgattcactggtggaaaatacaaaaaaccccagctcctgtttttcggatgaacggaacagtgatgttaagaaaaaaatttatatgtatggacgccgaatggtcccaaatgtcttaaaatggaaaagaatcgttttatttaatttcattatccgataattaaattcaaattaatcttttaaattaatttcttgttaaacaaacactatactttgcttttaatttaaggagagcagcaataaaatgcgaaaaacattgttactggagtgaacaggaaacagtgtaaagggaagggggcaatagcaatttcaattctaatcaacccccctttcccgttttccccctgctatcctgtggccaggaataccaaactaatctaaattatttacacgctacaatgagcagctacaattcgtcccataaatcacgactcccaggacacacgcgcccctaaacaagatttacgacccccgcaatggccgccaatggctaagcgcaggtgcgagcgagatggctgctggctcgcaggacggagtgatggaatccaacatggctgccgcagtgtctgccttcgcacaggtagacacacacacacacattgtcatagagagagggaaagagcaaaacgtcggcatggcaacgcctgagttttttcttagtgtgagtggtgagtcggcgcagccaaaccggaattgcgaagagagcactcacacgtggatgtgaatgtggatctgagcga

PCR verification status

Line verified as correct.

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