Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT43788 chr3R 14532826–14534900 (2074 bp) VAChT, Cha activityactivityactivityactivityactivityactivity
active
ventral nerve cord subset, posterior endoderm AISN, dorsal ectoderm AISN subset VDRC

Annotations

stageannotation termintensity
4-6posterior endoderm AISN3
4-6dorsal ectoderm AISN subset3
7-8dorsal ectoderm anlage subset3
9-10not active0
11-12not active0
13-14ventral nerve cord subset3
13-14brain subset3
15-16ventral nerve cord subset4
15-16brain subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0015323VAChToverlapping BDGP FlyBase
FBgn0000303Chaoverlapping BDGP FlyBase
FBgn0085311CG3428211329bp downstream BDGP FlyBase
FBgn0038643CG1430013399bp downstream BDGP FlyBase
FBgn0038642Muc91C14386bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tagtctgcagaaacctccatcggcatttaatgcccaaattcctctgctggtcgttgttctaggacttttctgcggtcaccaattgagaatcaattagccgagaatcgcaaacaaatgcctttattagatttcgttggctaatcaaatttgtgtctgctgtcccattaaatcattaagatcctcgtctggtggaatgtgtagatggtctagtcgtggtccggctgaagttcattaaggctgatactaccactaccactactgtcatccatgggccagaggagacgccaccatgccgaaagccacctgccagaggaagcaattttctctggtgctgcggctgctgcataatgaaggcaataaatataaatttcacacacaaacacaaacaagacgacgccgtcgtcattagattgtttgccttgtagacgcgtttgtaacgctgatgtgttcatagcggtttcgtgtcaaaacaaaagggggcgcaccaccacccagtcaccaccaccaccagaaaccaccgagaaactacagaccgagtttctccttccttattttctacccatctacggcagcccgaggggatggaaaaatgccagaaacaaaggctggcaggaaggtagctcgtaataagctaaacgagaaacaagtaacgcatttgtcttgatgccgtctgataagaacgcgcccgtacatctcgagggttgcccgctcggcattgagccatcaggattcaggaagggggacaatgcggcaaggggctggcggatgaaagggaagaaagggggagaaagaagctggagctggatctggaccagaagttgcacccaaatagcgccatcaaaagtcgtaaacgggtcgctctgatggtgttgttgattgctccgcatttgccaagctacaaatggttacattttaggccctgggttcgatgctggaaattagcaatttgccaggacgaatacgatatcgcagttattaataaaaaatgcacgtagagaaaaattgggtgtactcgtatataaaagcaaaatatactctcgagcgtgaactactaatctcacacgagttaaactatatgaataaaaaaaattgtcaacagcttcatgttttggaatcatactttctagtggcttgcagttgtaatttaaaatagttggaaattgttagatgtctgaggaatcatcttctgtctattgttctctgtgcacaaaactacttgaaacacgaactgctgaatgggagacataaaggtaaattacttttaccctgcaaaaaaaaaggcattgagtgcggcaagtccgagtaatttatgtggaaatcaatttgtaatccaacgctcacagttgaccaaaaaagggatgttcggtggaaactggacatgtgtgcaaaaacacggacattagacacgcacacccacacggggaagatcgagaaagaggaaaccatttggagctcactcccccccaatagccccgcccatttaatgttttgatttatagacagaccccatccactcctccgcactaaaggagctgctccatacgccccgtggtaccatcagtgccacctaaatgacgccctttgtgcgctcgtgctcctttatttccatttcggggcagctggaaactggagtacggatcctcgggctaagtggctgcgtgtccactgggagttgataaaagcacatcagcgcggcaacaataagagcaataaaaacaaggacctgcagcacagagggttgcttacaaaggcacaaagggatagataccctgtttaaattgacattttccatcgtcccaaaaactttggcaattaaaaaagtgctttacaacgactagccgagctaaggccaaccgggtaaaatcgattgtacacgaatcgcaagaccgcgacaagacaattaaacttgaaacagaaatgtcacttggcagtcgagtaaacacttggcagtcggaagagggttaaggtaacgctagcaacgctggccaagttaatcgatcaagagtggccaaggtgaggctcattagctggtcacagttcattagagccaattgctcgggaacgtgtcttagcca

PCR verification status

Line verified as correct.

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