Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT48356 chr3R 23280724–23282838 (2114 bp) CG13978, CG44290 activityactivityactivityactivityactivityactivity
active
ventral nerve cord primordium subset, dorsal ectoderm anlage broad, ventral nerve cord anlage subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8dorsal ectoderm anlage broad2
9-10ventral nerve cord anlage subset2
11-12ventral nerve cord primordium subset3
13-14ventral nerve cord subset1
15-16ventral nerve cord subset1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0039518CG139789187bp upstream BDGP FlyBase
FBgn0265317CG4429014059bp downstream BDGP FlyBase
FBgn0263401CG4344714158bp downstream BDGP FlyBase
FBgn0016061side17521bp downstream BDGP FlyBase iFly
FBgn0039519Cyp6a1823673bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ccaaatggaaaattcatgacagagagcagaaataattaccgcatgaatcgggggaatcaagtgaaagccgaaatggtttacagtttcggcttgcgaaagttgtcaatgtcacgacaacttactgctaatcattgtaatgcctccggctcagtgagacgacgaggacaaggcgaatgcttccaacgtaaaaggatggatggtaaataaatgagtcctggcattccatcctggccgcatgatgcggctgacttggccaactgtaaacgagcaataaatgcgggctcaagtgtcataagtagctgactgacaaagcttgtatctgtatccttgagtttgtatctcgactcgagcggcgaatcgtgaaatattaaatgcgcccgtgtcggtggcattgttgaaattaaatggatagcgcggggtagccagtaatgtgattaccaaaggagatcctctgactccgcctattgtcgtctcctgtcagttggctgcacttcaacttcaacctttcgcctccacttaggcacgcccgattgagcagcaaaagatgtgactctggatttggtgttttataatatttcctctatatatatatatatatatgtctttcattttttctttttgccactgtcatcgtgcgggctatgaaatatttagccaatgaaggggaaaatcaaacaagagattgagctgcgcagccaattatgtgccacgtcacgggattttctgtgttgtgttgtgttgtgtgttgcgttctgttctgttgtgttgtcggtggttcctacaaaatcagcgctcagactaattaaacgagaacgcagctccgatgtagcttagctttaactactagctcgccaacactacaatggcagcgcattgggtcattttgcaattaagctgcagtagcatgttgccggcgagggtcataaagcctgcatcccatgtatccgcatccgtatctatagcttcggccatactccgacaccgattccgtgtcccagtccctgtccctgtccctgtccctgtccgccccctccgtatgatgatgatgaatgagttaagcggccgttgccatgtagctgcacgtctaatgagatactttttctgccgctgccactgaagatgaggatgagttctaggatccggctgggcatgtaggtggagatggagccgggtagagcaacaaggatgagcatgtggctatgcccgtgaatgtatcttcatctgcaagtacaccattagtagcgaagggtcaggcgacgcctagctcaactgcaaatcatgactcgccccctttggaacactgggagaaactcagaaatcagtgcatagtgttgatccattattattactcattgataaaaatatagatattttctttttaataaagcggtcaaaggggtttatatcataattctacttcttatctaaaccatttataaagtgccagacttcctaactcatttgtccagtggagaaaatcgccgtcatcgtcgctgtccgtcagctctttcaactatgtaatctatggcatgtcagtgtctgtatctgtatctgtatcttcagccatctcggttatctacactctccactcaggagaacgcacaaatgcagagcgtatctgtgtgtttgtatgtatgaattgctcgatgcgtgcccaggcactaattgcgtctaattgaattgcaattgaccgtgagttggcgtatttttcattcgtttttgccgacaccgccagcgtcgatctggagctggagatatatcccctggttcagggagaattggggcagcggtggggctgcgagctggtaaactggcaaactggcaaactggcaaagtggcaaagtgggtgggaaaaggaagctggagcagtggaggcgacaacattgtttgatgaagatttacgcagctgctttgatttgtgtcaacaacgcccgccaacaacgacatcgcattccatcccatacacttgctcattcatggccccatctcaatcatttggttggtcatggcgccaatgatttggatgagcaactgcaggggctttaacaactggggagacaattgatttataatgactgtgaatttatttggccagctatgtggggagtatgcgag

PCR verification status

Line verified as correct.

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