Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT54914 chrX 495360–497457 (2097 bp) CG13366, vnd activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, ventral nerve cord primordium subset, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12ventral nerve cord primordium subset3
13-14ventral nerve cord subset2
13-14brain subset1
15-16head subset2
15-16ventral nerve cord subset1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0025633CG13366overlapping BDGP FlyBase
FBgn0261930vnd3177bp downstream BDGP FlyBase iFly
FBgn0029529CG1336519390bp upstream BDGP FlyBase
FBgn0016038mod(r)20203bp upstream BDGP FlyBase
FBgn0025640CG1336922141bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgcgaagagttggatacgaaagggaaagcattttcccataactgtcctttgtgcttccacctcctggcaggactcgtgcccacaggccaaatgcaatgttaatgaccaaactctccggcgaacacaatgtcctgatcccgccgtgaaaaatggggtttacaaagttgcggggcgctgctgtaattagccaatgcggggccgtaaatcggtggaggggtgggaaaagcggtgggtgggaggcgatggaagactggtgggggaaggcaaatcaaattaaggcgcaagttgatgccgcattttacagtcctgtctcttcggggtggcggatggagtctgacggttttaataatgttgttgctcatttcgcgaccagcgtcattatcagcatgtaatttctcattttcatagtcaattaagtcaatcactcgcccttttggccaccgcaaggccttgcagagctgaaagctgaaaactgaatactgaaggccagcccatagcatggaaagccacccctgttaacacgttggcggtggcgtgtttccgtttccgctttccacaccttttgtttatttgtaacgcaatttaaaagcgccgcgccgcgccgcgcgtttattgctcaattttgaaaagagaaaagggcattaggtattcatacacaatcaccggactcatcgatgagcgatggaggatgactggatagattcggcgggctcggaaaaatatacacccaccctcaaggcaataactgtaacaatttcaagcactaaaacgacacgtggcagctgcttttaaaattgaatttcctgtcatgtaatcttgtccagagtcaattgtttttgtatttctgtgtgtgggttttgcaacacccccttgtttttccgcccgcacgtgccgcattgtgttttccttgtgtgttttcgaaaggtaccccctcgtagtttggggtgcgtcgcggtcacactttcttatttatgaagatgcggccaatatgctgacgatttgctgacccactaataccaaaagtatactttatgggtgtgaatgaggttttatgcattcacagattgactttctaatggggtgtgaaaagccggggtgggcaatcggaaaacacggcggatacggcgggataacaaggatcagcaggtttctgtgggatctgaaatgcgtaattaatcgggggagattaggccgagaaaaaattaatagaggatggaaggtaattgaaaatgtaacatcaagacttgattggtaagtaagtcttacatgacagacgtacgtataataacttaaaacaaagtaattcaacggagtttactgctactacaactttttataaagaaggaagtatctatcttacttggccctctagcttagtcatcaccgtttttgcgcgtttcccatcgactcgatgttcacatgcctaattagcatgtcaataagtcgaaaaggaaccagaaatgattttacccctaatgaaagcattaaggacagatcgaggggagttgcatgtgtattcgcggagcgtgcgccattaaaaggccacgaacatcaatttatatattgcgttaccatgatttgcataaagggcacacgcatatctcataataaatacatatactccccctcagccgcgaaatcacggacaaaacaaagagaaaccccattaaaccaatataaatttgcactctctcatgacctcggcgagtgtccctttcatactctgtttgtgtatcctggtggttgctgcagtgtcgatcgactaatttgaatataaatgcgccaagcgccggtgttcctagcacctccttcccacgacatcgatacgatacgatacgatacgatacgatacgatccattgccattagcagacaaaagaacagctcctgtatacggacactgggagaaaagatgttagcgaatttttaaatgcaatgataaaatagctattaagcatgaatacaactgtctgcattgtcgaagataatcgaatgtaaaatacctgggaagtaaatagaatcggcgcattaaacttaaaaacattttcgctgtgtgggaaagtcgacggcgaacccactccacttctgtaagttcgacc

PCR verification status

Line verified as correct.

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