Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT55812 chrX 2361911–2364056 (2145 bp) boi, trol activityactivityactivityactivityactivityactivity
active
epipharynx primordium, ventral epidermis primordium subset, hypopharynx primordium VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral epidermis anlage subset2
11-12epipharynx primordium3
11-12ventral epidermis primordium subset3
11-12hypopharynx primordium3
11-12esophagus primordium3
13-14epipharynx2
13-14telson subset2
13-14trunk epidermis subset2
13-14hypopharynx2
13-14esophagus3
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0040388boioverlapping BDGP FlyBase
FBgn0261451trol2582bp upstream BDGP FlyBase iFly
FBgn0004050z17329bp downstream BDGP FlyBase iFly
FBgn0003714tko23903bp downstream BDGP FlyBase
FBgn0001150gt38912bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

cacatcgaatagggccctgggtttcggggcgggggtttcgtttgctgggccacttgaaaagcaattttttgaaatttattttccatttatcgctttatttattttctaccttctttcagtgtggccctgtcgctttgctcccctcgtccacagttcacctggtctatctgcttatgcgattagagttgcagcaaaggagaccaggaagatgacgacgtggatggtacaagattgggattgggactgcgactgggaatgggaatgggaatgagaacgatgacgatgacggcgatgatggtgatgatgctgctcggtgtgtttatttttgtttggaccgagagacctttttgtttgtctgcattttcgacgacgaacaagacggagctaaggaactgtgtctcaatgggccacaatcgaaagtaataatgaaatcccatcaacaacgagacaaaggctctctgaccattccgattcccattcccctttggccttccatcccttttttggcctgcagaatgagacgacgacacttggcttgatttttattgttgggcttttcccccggccctttgatttattgttagcgggaacgggctggaaaatgggaatgctctccggtttcaggtttggcattggtattggttttagttttggttttggccaagtgtccggttccctgaatgcatctatgtatctctatctctcttctcccagatgatcttgttctgcgaccagctgcctgttgcattccgctcgctcacctcttgccaatggcaacagaaatgtgcgtgcttaagctacaggtggacttggcaaacgacggactgtggagactgtagaaactggtggttatgttccgcgcatacaacaacaaaaaaaaaacaaaaaaaaactcttgagaaaagttaagttctgcaaagaattataataattgtttcacatattggtctaaggatctccacattacggagggcccactgtagttgtgcaacctctcccgatcccccatcccattcccaacttggggttctattctggtgcacggcacatagacagttcattaatgttatcaacgagcaaaaaggggaatgaaggatggtcttgggacccctgccacctcggatgacaggtttggttgtgcacttttctggtttatgtacgcgctggatttgatgtgcaacacttgttgttattttgtgattttgttgggggcccgctgacacataagagtaacggcaattggcaattggccattggccatcgcctgttggccaaaaaaggacatggccacatgaccatcgcgaaaaacttgtcaactggaatcgatcgatatggcagtggtaattccggggaagggggtttctctgatttaccgacatttacggactgcactgaccagatgaactactttcgagacactggccactggccattggccatttaccgttgcaaaactcacctgttgactgaaacctcgaagggcagctaaatcctctatccaaatccaattccaatctgcgccgcttgtcgcactctaaacgaacggtaaatattttgattagattttgatcactggtcgcagcattcttgcgattttcccatcacataagaaacaagcagtaaaagaacaatgagagccgagagaaaaggcagtccaaataacagaaacccattaaaatgttatggcattttcaaagcctttcgaacacacacacacatgcacacactcgagaacagggcgattggcatcggcttaaatcgaatttctggggatatggagatcacttctcgacggacattcgccaagtattgatgttccgccagggcataatttatagttattaggtgtttcctacgcgacgccgctgcctttttagccggctgccgttataaaaataaaaacaaacttggcacacgcacttttctcgctctcgctcgttctctctctcgctctctctttctttgcacttcctaatttgaatgcacctcaagggcagccgaaccagcactcacagggatttagaacagccaaaaaaaaggtaaacaaataaccgttattagcacgacgattttattttgagatatatattcaaatataactctgttatagtttcgcgcagactccgcacacacgtctttcttgctc

PCR verification status

Line verified as correct.

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