Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT63956 chrX 18660722–18662797 (2075 bp) CCKLR-17D3, CG6891 activityactivityactivityactivityactivityactivity
active
brain primordium subset, ventral nerve cord primordium subset, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12brain primordium subset2
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset2
13-14brain subset2
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0030954CCKLR-17D3overlapping BDGP FlyBase
FBgn0030955CG68918539bp upstream BDGP FlyBase
FBgn0030956CG1825914576bp upstream BDGP FlyBase
FBgn0030952CG1260918384bp downstream BDGP FlyBase
FBgn0030958CR690019116bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agtgcaattaagcaattccccagccactccttttcttgttgcccggtctccttttcatgtaagcctgttagatgatttcccattgtaaagcaatttgtacccacaccctgcccatccctcatattcttttgggctaccactatcgatggggctacacaagtgcaagtcaatagggtggactgctgtaggtgaaaaactcgacaccgaaagaaaaagacccgattcgaaaaattggtcaattttagcgcaattaaatgagaaataatttctagtttttcaatcgattgttttatagcaccaaatcatatatcttaaccgtaaaggcatcaaataaatatgataaactgatcaaatgaaagcataatttgcttgtatgtatgcgtgtttttggaatttatagcttaccaaaacacttgtgaaatttgcaaatatacatatttgttcatacacaatttagacttcaatgcaataagctgtaaggtctatggtttcaattattaatactcggaaattgttgtgctagcagatacatttgtggtttgttagatatacatatttgcttataaagatatatatgtatgtacgtattgcattcaaaagcaataagcagtaaggtaaattggatcaagggacgagtatttaagacagcctgtatatgttccctttactttaatgcgacacctcattcaggcaattaaggtccaccctaatgtgcttatcccttcagccatctgcagctgcattgtattatattggaatggtattttctcgcaaaatgatatgcaagttttagattgatacgtacaattgcagtgattactactttagttacgaatgatgataggtgatgtagtagatatatatttgctaccaaagatagttacaccttagaatcctaaaagaaataagtgttttgtagtcgcagttcgtttctctagttcaacacatccagccaaccaaggtccaccctaatgtgactgcacttcagctgcactgtattatattacattttagctgcacaattgtttactttctattttaattatgcatgcaaactaatatgagcagtaaagatggattacctccacctgttccgttggagtgcatcccgtccaggcaaccaaggtccaccctaatggggtagcccttgcccttccaactgcattgtcacattggtctcgccctctgtcgcgtttgttgagttaaacccctgaaattgaagtttacttttgattgacggcggtgtgtgatgctctaagccagaaatgctagcatgtgtgcgcttaaacttaaaacaaacagcagcatggcatttccattgccatttccctatcccatttccagttttggtttttcgctcgctcaactttaaggcttttcggctaagcagcttgattgattcgcgcactgagtcttgacaactaaatcatttcgagatgccaatacaatccgccagagccttgcatgcgctgaaatgctttacatacgacatgcatatacatatatatatatatatatatacaggtatatatatgctccattctggcgcccacagtgcgtaattcaattggcaaatgcaaaactgacggcaaataaggcggcgtcggcggcaaatgacgaacccaaattgaattcgatgccgccgccccccctttctacacgcccatgatgtttttcttttggcaactgattgaatttgatttgtgcgcagagtgggcagcagcacgcctttgaggccagaaaaaggacacggacaggaatggagatggggatggagatgggaatggggatggcagacgtgttgagcatattacgcatacgacacgcagtcctcgagccccgcataaatatgcgactctgacaggccggaatttataagcgtcagttgggtgataaaatttgattgccgcaaataaaaacgaccacactcagcaaaaaaaaaagggaaaactcgtccctttaactacagtcgagatgatttggtttacccattcaacaaagctggaaatacctttaaattctcacgcaaaattcttgctatacttatgctatgcagccacttaaatcttttgtcca

PCR verification status

Line verified as correct.

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