Fly Enhancers @ Stark Lab

ID Coordinates Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT13456 chr2R 4134452–4136542 (2090 bp) CR44446, CG44439 activityactivityactivityactivityactivityactivity
active
hindgut AISN, posterior endoderm anlage, brain primordium broad VDRC

Annotations

stageannotation termintensity
4-6A-P stripes3
4-6hindgut AISN4
7-8posterior endoderm anlage4
9-10brain anlage subset1
9-10ventral nerve cord anlage subset2
11-12brain primordium broad4
11-12ventral nerve cord primordium broad4
13-14brain broad4
13-14ventral nerve cord broad4
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265639CR44446653bp downstream BDGP FlyBase
FBgn0265632CG444392149bp upstream BDGP FlyBase
FBgn0265638CR444453448bp downstream BDGP FlyBase
FBgn0265303CR442764931bp downstream BDGP FlyBase
FBgn0013726pnut6651bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

gcgaaatgtacaatcagggggttggttggaaaaccgagccgacgaagaaagggggttcgggcaggggcaggaggttgccaggggtcgctgaggcgcaacgacctttccgcgttccgggggttttctttgcttttgcagctgttgtttttgcttgaacgaaagattttcgtcaagacaccccgaaacaaaaaaacagtcttggttgtgtgcaacgcgtgtgaaagttctgcagttccttagttccgcactggatccgtattcctggccacgcttcagccattttgttcagtattctccggctttttgggcagcctattcccgatctggctgcggcgcacaagaaacccgtccttgggtggggggaatgtggcagaagcgtgtgctccgggatctaggggagaaaactggccctcaggatctcacgttgtggcaacaaaagaagttcgccaaggaaattacagttcctgtgaagagagctaaatgtcgtaaattttggattcattctaaaacagcaggcaacaaaaaatccccatttattttggcataaactcgtattgaggggaaaacaagattgcgcaacaaaaggaatctcccatgggtttgtggcaaatcacccgtgatgaattatgttttaaagtattttatttgcttcattagaattgtttttcatttgagaaaatatatagatttttggttaatttcttaaacttggatcaacaaattatggattaatcagatatattaaagttcttggaactaaatagcataaatcaaaacagattttaaatttcagagatacaattctgcgacgggagtctgcagtgcacatcatcacttctttatttatgttcagtcaaattcgtaatttttttttttccttttcccatttcctagtaactagaagctcagttgctcttcatttcgtttgaatatcaattttgtttgttgaaaaaattatactggctgccaagttcgataaaattacagtcttcttatccagacagaccttgggctgttctagttctcggtttgttcattaatgtctctgagcacttacggctaaattgtcggccaagtcaatgtaaacaaatacgcgaccttgatgggcgcgctaatggctttatatggcactcccattcgcactgtgcgtgtgcataatgtgcgatgcagtgtcctcgactcaaggctacagtttatgatttggcgaatttccagcgagggagttccgtgtaagggctcgaaaggatgagatgcgcaaagttgacggcagaactgcttgcgaggaaggactgtgggtcaaaaggatgcaagaaaggataactttatgggccgctcataaagaccgtttgagcattggacaatatgagcaatgggtgattatttgttttggtcacaataaagacggcgggtggcaaggataatgcaaggatatccttctgcatcctcaagccattagcacgacgattagcggcttgtacaacgggatggtctattcggcggatggaagggctgagtgaaacttccaggaatcgaaggaaccttttaccgattctccctgcattttttagttttgcgtaaaaaattcagctagatttgcgtaaaaagcgcttgtcaacggtttgaagagtcagttcgaattccagggattaaaaagggctttgttttggttagaaggtagttttatgttagccaatagtttcgaggaatcctttacataatgtttgcatgcttgacataaaaagtgtgtttatatttgcgtaaaaatagttgaattcctgctaggaaagtagaaactgggaaactagaaaaaggctttgtctggttatgcggcaatgttatgtaagcttgttgggccattcttacttatttaatagaaaattcttgggaaaaggcttgctgtgttttcacgataaaatttatttgagtgacagcagcaatcataaataatctgccgataagctgaatacatattttatcaaaatatttgagagaaaataaacagttgatagttgtaaatctcgcccaaaaaaaaactcagggcgaacccactaactaattttcccagcccctgtttcatccccaaatcgtcag

PCR verification status

Line verified as correct.

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