Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT15409 chr2R 7907290–7909826 (2536 bp) otk, CG8964 activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage broad, ventral nerve cord primordium broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage broad4
9-10hindgut anlage3
11-12head subset3
11-12ventral nerve cord primordium broad4
11-12hindgut proper primordium3
11-12posterior midgut primordium3
11-12trunk mesoderm primordium3
13-14brain broad2
13-14hindgut3
13-14ventral nerve cord broad4
13-14proventriculus3
13-14midgut subset4
13-14esophagus3
13-14visceral muscle broad4
15-16ventral nerve cord subset3
15-16midgut chamber4
15-16hindgut3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004839otkoverlapping BDGP FlyBase iFly
FBgn0033674CG89643361bp upstream BDGP FlyBase
FBgn0265365CR443063891bp downstream BDGP FlyBase
FBgn0259985Mppe5829bp upstream BDGP FlyBase
FBgn0260012pds58200bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgaatccaatcgaacctcaaactcaatctgaactgcacgcgttcgaagtctgtttattactgaactccgccggctgttcgaagttgttggtgggaaccggcttttgctgctctctcagcggaaaatactgggttcagttagcgctctctccggtggaatatacctactcgtgaccagtatttcttgcatgccctgtatttctgccagtgctgccgagctgcagcagtcgtttgtggcgcggcaagtttgaagtggaattttaaagacttaactcacaagtttcatttaatttaaaatacaccaaaacctaaaattaatttatataatatatataaatatataatatttataaagagcaaccaacttaagatgatcatcgtgagatgtggtaaaaatggtttattgtgattaaaaaactaagaattgttttatgagtttatatcaaacatgagtatttaatttgcgattattccccctagctgaacccgacactcttcctaatttcatttgatgaaataaagctatcagttgtctgcaatcagatcagagagtcactatgcaaaccgcccgctgtctcatcatccaaccgtttccccctgtttttttttttttgagtccaaacaataatgcgtcttaatgaccaaagcaagaatcagctaaaatggggtggccggtcggcagtgggaggaaatccattggtggcttgctgcttttacgagcagatatacgacgaaactgcaagatacttccactaccaattttccacactcgaagaaataaagaaaattttaaaatgttctatgagagaaaatgttatctaagagcaacgaaggaaaattttgataatacagcaaaaccaatttaaaaacaatgacatataaatttaaatccaattgaatcttttgattgaaaggttcggctcttaatcatataatgtttataaaactgtagaagttttctatgaaattgttggataggtaaaatggttgattggtataaaattatagtttctaaactttttaaacaaattctaatagatcaaacctattgctgtgcatctaagacagtccttggctgctactgtgcgattatgagaacgggcctgcgtgagtgtgtgtgtggatttccattttatagttttccgcttgatttttttacgaggcctttcaaccccgcacaatggaaaaccaagcgaagagccacaaaaacaattgcagctgatcctttagccggcgttgactgacacccaagagtcgtaaactgccgttgccatttgtataaactatataaccgagaggggtggtgcccaccccatttcctccttcccccaaaagtcccaaaccccgcccctgattaacagtccgggccctttgtgattatatctgcgtggaaatgcgtgtgtgcggttatcaaaggctggccatggcgatgcccagaagggcgaagggaccgaccatccaaagttgggcctccagtgcgcttttccacctcccatttcccagtgctcgcgctgactcttcggacgaacgacagttattgatgtcataaagttggagatttatgccatcgcctggctggaatgtagggcttatgttttattataggccttgttttgaatttggttccttttcgccttcgcctcccttgattttggggtgcaaagcgatcgggcgaaccgaagctgcaaatggtgtgttaataatattgtattaacttttcatattgcaaaggggttgccaaggggtaatatgttaattggataagtcgcacgatgccacaacttcatttatttcaaaaatatgagaccctctttgctaaatcagtagataaatacatacatacaaaaagtttcaatttgaaaaattttattttcgaaatcgcactctttgtcggaagtcttaagtatatccttagaagatcgttacaaatttgattgctctgttcttggaaagttttaaacgttgcaacttattcctggccaaactagaaagaaatcttttcatcttttagggtctttcgactataccgccatccatatatgtttaagttattatttcgaactgcttaccgtaactcaacgcctcgcaatcgtataattttatggagcatcccaaaagttgcaacggattccggctagaatccaaatcggaatgccgcccatagcaaacatcaaacattagaaggcattaaaataaattttagtaacgcggcctttgcgtagactaaacaaaataaacatacgtacatatattgtagtacacagcgtttgaaggtgtttttgggctgaggcccgccccgtgcgcacttactataaacaaataaggcgaaaaagtaccaaaaaaaaagaaatagaaaaaaaagggggaaatcgaagaagaggaaaaacatcagcggaagggcccccaacaacaagtttttaatgcatgtcgatgtcgtcgtcgccgccgcagatcaaaggcaaatcgcctatacatacatatgtacatatgtaggtgcatggtacatacatatagagaggttggggtgctgcataggat

PCR verification status

Line verified as correct.

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