| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT17409 | chr2R 11784916–11787077 (2161 bp) | sli, CG33463 |
      active |
procephalic ectoderm AISN, ventral ectoderm AISN, ventral ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 5 |
| 4-6 | ventral ectoderm AISN | 5 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | mesectoderm anlage | 4 |
| 9-10 | brain anlage subset | 2 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 9-10 | mesectoderm anlage | 4 |
| 9-10 | hindgut anlage | 3 |
| 11-12 | ventral midline | 3 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 11-12 | hindgut proper primordium | 3 |
| 11-12 | malpighian tubule primordium | 3 |
| 13-14 | anal pad | 3 |
| 13-14 | malpighian tubule | 4 |
| 15-16 | ventral nerve cord subset | 4 |
| 15-16 | anal pad | 3 |
| 15-16 | brain subset | 4 |
| 15-16 | malpighian tubule | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0264089 | sli | overlapping | BDGP FlyBase |
| FBgn0053463 | CG33463 | 985bp downstream | BDGP FlyBase |
| FBgn0265511 | CR44373 | 18584bp upstream | BDGP FlyBase |
| FBgn0034049 | bdg | 25629bp upstream | BDGP FlyBase |
| FBgn0050085 | Rif1 | 28265bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgaataaaaagcgagtgcagggggatggatggtggcggttgccagtcactgatttacatttgatacagagaccgagcctcggactacttgaacaatcagattcaatttgtgccacgcattcgttttcgttttcattttcattttcttgatctgcccccctgaacaacaagtgatggtgacgatcaagtgtacggcccctacagtagattatgctctatttgatttaggcatggattttattattatacttttggtggctttattattacaatggcgcctcgagtgccgaaacgcaatcttcatttatctcgtatttatctttatctcgactgtgtgggctcatcttcgaaatggacaaacacaaaagctgggcattatttagtttgtcgccgtgtccccggtttcaacttgttttcgaggttaccataataaacagccccacctgcgccattcgcgcacacacatcatttccatgtaaagttataaaatgtttcacaaatccataaaaacccaaaaggtaaagaatctgaggcgtgcgtttaggtccacccaaatcccctgtccgatcccatgccatactattccactccatgccataccataccactctactccattccattccatgccaccagaatcccaggtgcaatgcgtgttgcagttgagctctctgcgatgttgttgttttgtttctgctccggcttttgttttccgcatttcgggtcaggtagagcggagcatcttcctcgacgcccctaaaagccttcgcattgttctcgccagtagaagtgaaatatgttgcagcgagcatgctgctgcatcaccgggattaggacaggtaaggttgtaaatttcaccagccacgggagtcgaccctggagtcaaaaggttgacgagtaaatgtggaaaccctagttccagcaaggaataagggtataccaaaaaaatgatagccctcaagtaatctcacaaagagggtaaacaaatcgttaagaaaaattcataaattcgctaaattaataacataacaaaacggcataatgacataaccaaagaaatatcataatgaaaatctctcttttacacaagaaaccatcataattccccaatccttgtgacatagcaacgcactaaaattatggttaaatttgccaaagcaaggaaaccccggagtttatctgctaataacaataaaatgccatcaatggttcgtattttgtcaggctcaataaaaacaacagcataaatgaaacatagccacaaagtactttcattccgtcatatgtctggccaataaagcggaagtttgggcccccaaccaatgcccatggttgtacataaatcaagttattctttattaattcttaggcgaagcataaagtaaatatcttcgaggactggcagacgcagcaaagcaaacataaatttggagctctattaatctggaggtcataatccatcgaaccaccctctttgggatatttgaagcgatgccttgggatttgggatatattttaaagacatttttaaatagaatagaataaataaataaatatccttataagaacttaactattgttaaattcatgtcaactttaatataaaatcaagtgcatcaagaagacatatttgtcagcttcaatttaaaagccaaaattactattttgtgaaaatgcccaagaacatgcgaccgatattgttaaatggaaatttctttggtctgccccgtgtcctgtgtccttctgccccagcaccaccaccccccccccccctccgtttacactccaagtgacgcacacgcatcgtatcaaatttcatggctgccgcatgggtgtgcgtgggtatctgtgagtgctgcgtcgtatccaggttcgtttcgtatcttttgctcttccactggcggcgtgttgatgacagatttcgtccgtctgtccgtccgtccatccgttcgtcgctgtgtcgtttcattttcgtttcgttgaagtcatttttactcatttattgtcaccgttagagtacgtcagagagtgtgtgtatatatccttacaagtactcgggaaccctgcaggcggtcatccatggtattgattccacttccatctccacttccatttccatttccattcccataccgacttcccacatccatttcgcccgccaca
PCR verification status
Line verified as correct.