Fly Enhancers @ Stark Lab

ID Coordinates Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT17409 chr2R 11784916–11787077 (2161 bp) sli, CG33463 activityactivityactivityactivityactivityactivity
active
procephalic ectoderm AISN, ventral ectoderm AISN, ventral ectoderm anlage VDRC

Annotations

stageannotation termintensity
4-6procephalic ectoderm AISN5
4-6ventral ectoderm AISN5
7-8ventral ectoderm anlage4
7-8procephalic ectoderm anlage4
7-8mesectoderm anlage4
9-10brain anlage subset2
9-10ventral nerve cord anlage subset2
9-10mesectoderm anlage4
9-10hindgut anlage3
11-12ventral midline3
11-12brain primordium subset2
11-12ventral nerve cord primordium subset2
11-12hindgut proper primordium3
11-12malpighian tubule primordium3
13-14anal pad3
13-14malpighian tubule4
15-16ventral nerve cord subset4
15-16anal pad3
15-16brain subset4
15-16malpighian tubule2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264089slioverlapping BDGP FlyBase
FBgn0053463CG33463985bp downstream BDGP FlyBase
FBgn0265511CR4437318584bp upstream BDGP FlyBase
FBgn0034049bdg25629bp upstream BDGP FlyBase
FBgn0050085Rif128265bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgaataaaaagcgagtgcagggggatggatggtggcggttgccagtcactgatttacatttgatacagagaccgagcctcggactacttgaacaatcagattcaatttgtgccacgcattcgttttcgttttcattttcattttcttgatctgcccccctgaacaacaagtgatggtgacgatcaagtgtacggcccctacagtagattatgctctatttgatttaggcatggattttattattatacttttggtggctttattattacaatggcgcctcgagtgccgaaacgcaatcttcatttatctcgtatttatctttatctcgactgtgtgggctcatcttcgaaatggacaaacacaaaagctgggcattatttagtttgtcgccgtgtccccggtttcaacttgttttcgaggttaccataataaacagccccacctgcgccattcgcgcacacacatcatttccatgtaaagttataaaatgtttcacaaatccataaaaacccaaaaggtaaagaatctgaggcgtgcgtttaggtccacccaaatcccctgtccgatcccatgccatactattccactccatgccataccataccactctactccattccattccatgccaccagaatcccaggtgcaatgcgtgttgcagttgagctctctgcgatgttgttgttttgtttctgctccggcttttgttttccgcatttcgggtcaggtagagcggagcatcttcctcgacgcccctaaaagccttcgcattgttctcgccagtagaagtgaaatatgttgcagcgagcatgctgctgcatcaccgggattaggacaggtaaggttgtaaatttcaccagccacgggagtcgaccctggagtcaaaaggttgacgagtaaatgtggaaaccctagttccagcaaggaataagggtataccaaaaaaatgatagccctcaagtaatctcacaaagagggtaaacaaatcgttaagaaaaattcataaattcgctaaattaataacataacaaaacggcataatgacataaccaaagaaatatcataatgaaaatctctcttttacacaagaaaccatcataattccccaatccttgtgacatagcaacgcactaaaattatggttaaatttgccaaagcaaggaaaccccggagtttatctgctaataacaataaaatgccatcaatggttcgtattttgtcaggctcaataaaaacaacagcataaatgaaacatagccacaaagtactttcattccgtcatatgtctggccaataaagcggaagtttgggcccccaaccaatgcccatggttgtacataaatcaagttattctttattaattcttaggcgaagcataaagtaaatatcttcgaggactggcagacgcagcaaagcaaacataaatttggagctctattaatctggaggtcataatccatcgaaccaccctctttgggatatttgaagcgatgccttgggatttgggatatattttaaagacatttttaaatagaatagaataaataaataaatatccttataagaacttaactattgttaaattcatgtcaactttaatataaaatcaagtgcatcaagaagacatatttgtcagcttcaatttaaaagccaaaattactattttgtgaaaatgcccaagaacatgcgaccgatattgttaaatggaaatttctttggtctgccccgtgtcctgtgtccttctgccccagcaccaccaccccccccccccctccgtttacactccaagtgacgcacacgcatcgtatcaaatttcatggctgccgcatgggtgtgcgtgggtatctgtgagtgctgcgtcgtatccaggttcgtttcgtatcttttgctcttccactggcggcgtgttgatgacagatttcgtccgtctgtccgtccgtccatccgttcgtcgctgtgtcgtttcattttcgtttcgttgaagtcatttttactcatttattgtcaccgttagagtacgtcagagagtgtgtgtatatatccttacaagtactcgggaaccctgcaggcggtcatccatggtattgattccacttccatctccacttccatttccatttccattcccataccgacttcccacatccatttcgcccgccaca

PCR verification status

Line verified as correct.

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