Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT20029 chr2R 16838480–16840613 (2133 bp) CG33704, hbn activityactivityactivityactivityactivityactivity
active
dorsal ectoderm AISN subset, brain anlage, brain anlage subset VDRC

Annotations

stageannotation termintensity
4-6dorsal ectoderm AISN subset3
7-8brain anlage3
7-8dorsal ectoderm anlage subset2
9-10brain anlage subset3
9-10ventral nerve cord anlage subset1
11-12brain primordium subset3
13-14lateral epidermis subset2
15-16lateral epidermis subset2
15-16midgut chamber2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0053704CG33704overlapping BDGP FlyBase
FBgn0008636hbn3693bp upstream BDGP FlyBase
FBgn0000044Act57B4545bp downstream BDGP FlyBase
FBgn0065059snoRNA:6604911bp downstream BDGP FlyBase
FBgn0020617Rx13946bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

ggtagcgaattggcagtcaggtgtgacccgatatagttggtaacacgcttccaacttgctacgaatattgctagttttccgcgtcgtttaataaacaaaatgtaaacaatgtttaacagcaatgacacacatgggtccaccacccccaggtaatctccttgttgttgttgctattgctattgcctttttattaatataatttatgagcctgtggtcgtgagcgggaaaagccagcggcaagttggaaatgcaggcaatccgaatgccagcagctggctaatttcacagcgcacacatttgattaacttaatttaatagtatttcttttttccccaacgttatccgagctgctagcgctcgttttgatatatttgtttgtttatttaatttattattatagttacgactatgcgctctggttaacagctataaatgcgattatatagccatcgatcattgcagctcgttgggtattccattacttttcgattatatttagaaagttcttcgagtataatatatctatatatctttataatgattgaaatataaatggtgatatgaaagagcatgacagacatagtggtcacaacaattgagcgaggtagaccattggctaataaggacacaattggctgccagctgtctctatatgcagttcgaattctacctgaactggccagagttcgcatcagacaaatcgggcatgaaaccataatggctagaatcggcaaaacaaaaaccacgggacactgctctttctttaatcgcggccagaggagacgagtcgtttgtcagcgattggcaatcgataaaattaggcacagcttagccacatttgaaagtcagcaggccggaatccttggcagaatgtgctcacctttctgaggagtctcagctggaaaggatctggggtcggcgcgctttgaaatacttagctggagcggtggcagttgacacacaaaagtatcggatttctcagttgtcgccagcatacttagtatccttaatatcctgtcggaaatgttttcgttcgcaattgcacgttgcggtgtgttggcaatttgtacatagtttattttttccatcatctattctcgaagggaatgcgatcgccgatcgacggacacttgatacttctcagacaaattgtcggtatatgtatgtccttttaagtggtcacaaattacagcaattacgcagcgcccttgtgtcctttttttttttttttgtgtggcattggcagtaaatgccggcaaaatggcgctcattaggtatattccttgtgcaatcttcctttttcacccacagaaagccagacaatctgcgtaattacttcgctgacaacttttgatgaattaaatgcgaaataaatttttaagtgcgcgtaacgagcagtgcgactgctgtgccaaatgaaatgaaaatacggcggcaaacaggacgagcaggacgaacaggacgaaaggcgattctccgcagagagagaggtgaaatctttcttaagcgtctgttgagcggatttaacttgtttaattaccgctgtattcactgcatcatcaactgtcgctcattacgccgggatttcatacatatatatatatcacttacatatatacttatatacttatatattcaaaaatgctggcagttttttaagtgcaccgcccaccgtcagcatctcatatcgcgtccacttgcttgctgttttgcgtaactgttaccattttaatgcgctcgagtgtcgaggacgaaattgattttcgtttagcattgtgttgggcattttgaagagcatttgtgctctcgtcgaaaatttgtgccaacacaaggtgaaatcgcactgagccgagcgcaaataaaatggagggattggatggctgggtcctcgacactcaatttcgtcgagccacaaatgcgaaactcgaaggaccacttgataaatttcatatatttatagcccgcagagtgatgcgctgcatttgcacactgagtgaaattccatgagcacacacacagacacacgaagagaaatacatacacacacacacacacacaaggacattttgggtggcccggattgtcgatgggcggcttaccccgcccacttttttgccacccaccactgcttctt

PCR verification status

Line verified as correct.

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