Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT25340 chr3L 4081250–4083336 (2086 bp) Gad1, CG14989 activityactivityactivityactivityactivityactivity
active
ventral nerve cord subset, brain subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset3
13-14brain subset2
13-14visceral muscle subset1
15-16ventral nerve cord subset3
15-16brain subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004516Gad1overlapping BDGP FlyBase
FBgn0035495CG149896331bp upstream BDGP FlyBase
FBgn0016013Faa7297bp downstream BDGP FlyBase
FBgn0024179wit9534bp downstream BDGP FlyBase iFly
FBgn0052259CG3225910970bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agccaaatgggagcagacggctaaacagcagcagcctcatttcctgcgagaaaaatcgggggaagcgacgcctgcttccgagacaaggccgcagtttccggaggttgggggcgttgcttccacatgggttggagtgggtggtgtgcgttggtgtgggttggctagagtaaatacgcttattatcgatactccaaacacaattgcggtcacgtgcgaggactgcacaaacatcggacaaaggacaaagacagcgtcgctcgcctggggagcgactgcctctcgcattaattttcaatgaaatcaaatcagcaaggacattcaaaacaagctggagcgaaatatgtgagaagcaatcgacttggggataccatagaatttcgaaattatattaggaactcaattgatacattccaagtagcataccaatgtagtcctcattattatatatatttttataaatcttattgtaaaactggcaggtagttccatcagatcccaagtcaaaacctcatcttacatatatgaataagtactagtgagtactgaacttaatcctccctaatatcccctttttcatccactagtgggtatgaaaaagttaaaagtgaaacgtgcgaatgacttttggctgctaaagccgcgcccacaaagaacccttttgcccgatttatgattgatggccgagtggatctgaatcgcgtggattactacagactacggacccccaggcgagtgtttttgaaaggtgtaaacaagccggggtgctgctcaatgggccataaaatggcattgtctgctgtatgctgtctgcttcctgcgaccaggacgagtagatctgcccgagtgccatcaatatgctaatgtgcttatctagagggctgcacactttgtgccctaatgccaccgcaaggtccagaggcacgcgtcctgcgctcgtccttaaaaagtgaaccatattccacggacaaaaggcatatgctaagcagggacaaatttgattaatccccaactgagcaaacttcacaaggtgatgataaggaagtcagcaagcttagatcacctctgaatatattcatcacacatctcggggaaaccagggattcaatagaagttcagatttattggtcgggaataatagagatccttaacttacccgtcttaacttggtacttcaatgtggtggcacagtcctcgatgagctgctgcagtggcaaggcgcgatcgggcacatccagatcgagcagccgcttcatgtcctcgggatggtggaagtccagaaccttctcgttccggtcgttggtggccttcacaaagtccagcagcacatcgattaccttcagcaggaactcccgtgtctccggtccagcggtcactgttgtgggcatgagatctggataggaaaaacaatagcggtatgaaaagagggtgcggaaaaaaccaaatgagaattccttatcggtaaatatgaaaagcgtgccccaccgctgacagaaaaaatggtcttcctctcttatcgtgatatatggctattattattacaatgatttgtgggctggcgcagtcgtaaaaagagatgactggctttaaggtaagttaagtcgaatgtcctacggggcaagatgagatttcaattatttttttagactatttctatccattcactgcgagaatttggaataatcataagaatttctttataatttttaattttttctatgttttaaacatatttctatttgcattgaagtacctctattctcccattacgttaatattcacttagcggtaataaaaaacttttatagcgattgcatttattattatacattaagagtgtaattttcatgtctttcaattacaattttatttaattttactgcccggaataacgaaacactgggattaaaacgctgtacatcagcgaagcttattcggaaactagcaggatttgggcatcacacccttgtgggttgtacatatccttggtctcggtgtccttgccttcgtccttctgcggtggctgcaattaattactggggctttcgtttaagcatcggcagtggccactaagccagcgagcaaatggg

PCR verification status

Line verified as correct.

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