Fly Enhancers @ Stark Lab

ID Coordinates Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT4437 chr2L 8818056–8820232 (2176 bp) SoxN, CG42710 activityactivityactivityactivityactivityactivity
active
brain anlage subset, brain primordium broad, brain broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8brain anlage3
7-8head epidermis dorsal anlage3
9-10brain anlage subset4
11-12brain primordium broad4
13-14brain broad4
15-16brain subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0029123SoxN7589bp upstream BDGP FlyBase iFly
FBgn0261627CG4271035557bp downstream BDGP FlyBase
FBgn0032069CG946836805bp downstream BDGP FlyBase
FBgn0032068CG946641794bp downstream BDGP FlyBase
FBgn0052986CG3298644720bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ggatctaattgcagaacggggcaacctttttctccttcccaactcgtatttttttttttttttgcccagccccggcgactgcaattaaaatggaaccacgagcagggcaaggcccataccagagcatctagatgatttcagacgaagcgaacagcatgccggaaaaatcgactcaaattacagagacttagcatcggatctcgggtcgctactggcatagctactggttttgggtattggtactgtggtgctggtactatggtactacccctactcataccccagaaaatctcgacggaggaggatttcgtgtttacagtacatcgtcgaataaaatttgcgtaccctaattgccagctgtcggccgggaggattttgcacagtgtactttctgctaaatttgagcgatcccttttagctgattgatctccagccccgtttcgatgagtaactagtttgtaaatttgccggggactttgatttcgcatcgctttgtttgttgttcttaatttcatgcggtcatgggtttctatgagtacttagtttaatgttaccctaaacgatacttgggccatgcgcaattttgtgtcttcattgttgattaagagattcgattgggtgatagcgccgatacaggtggtctaattatctgtcttacacagggcggcatcgattacatctagatcccgaaaatattctcatttgaattcattaccttagcgaggctagcaaataattctcaggaatctaaggtattgggtaaggataaaactataattattttgtaagtattgtgcttcagttcaccataagtatttaaaaattttagaaattacaccttaatcctatctgtaataagatacattcggattcagtcttaaatttcctatgaaaattcctaattatctttaaagtagccacaaacatcaaacgtggaccacaaaacccgaaggcgtatttgccttgaaacaaaagctcgcttcgcttaacaattagatcaggcctaagtcaattacaaaacttttgcttactaattacttatgaattagtgagtgggctggtcagtaagtagaaaaccaaacaaaattcaactgaccttaaatcatttaatcagcatgaaagtccccgggccgtttggtatatttgcaaaactcaaactgggatgacaactgtttgcagattttaatctttcacaaaaagtccacagtccgagtactcacccggaatacgtacgtatatactatatagtatatgtatggggtatatatatcgtgtccagttcggtgtccagaggagagcagcaaaaacttgctgtgacacttgttagacgggctgacagctgctggactttggccaggagccgggagtcgggaacttggattgggattgggcttgggcttgagattggaatcgggatgttcggagtgcagatgttgtcgtcatcgtggcgattctcgttgtccttcagcggctctgcagctgccgagaacttggaccaccggacaatgcgagatgacgacaagtttttcttgcccgcccaacgactttgacagacgccataacttgggacgcagagcaacgccttaacccaggggcagcttccttgtagcaccactccacctccagctacccagctacccaacatcccaacatcccaacagcccaacatctcgacatctcgagtaatgaggacaaagttttgcattcgtaatgcggactgtggacttgagcgactgagactgagactgcactgtgctgcagcgacttgggctgcaaatgtttcggtgtttctgtgtttcggtggtggtcaggcgtggtgcaatttgcaaacttcatttattcacgcccggagcgaagcgctagatgagcccttccttgttgtttgctttccagtttctggccaaaagtttgacgctttcgacaaggcatcggagcccaacaactgaagactcttcaccctgggtttcctccgccattcatttcaaattattgggctcgtcgtggaagtcaacgatttgtctgtcactcggctgtttaaccagactttgttgcataaatgcttcagttttgaagtaacatttatggggtactttgttcggtacaatgtagttgtgaagtaactataaaatgtatgtatttaaaatggtcttaaaaagattttgtatccgagagcttca

PCR verification status

Line verified as correct.

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