| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50230 | chr3R 26821511–26823616 (2105 bp) | 5-HT7, CG31007 |
      active |
procephalic ectoderm AISN, anterior endoderm AISN, midgut interstitial cell | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | dorsal ectoderm AISN subset | 3 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | anterior endoderm AISN | 4 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | head subset | 2 |
| 13-14 | midgut interstitial cell | 4 |
| 13-14 | midgut subset | 4 |
| 15-16 | head subset | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | midgut interstitial cell | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004573 | 5-HT7 | overlapping | BDGP FlyBase iFly |
| FBgn0051007 | CG31007 | 3333bp downstream | BDGP FlyBase |
| FBgn0051008 | CG31008 | 5784bp downstream | BDGP FlyBase |
| FBgn0062411 | Ctr1C | 31470bp downstream | BDGP FlyBase |
| FBgn0039812 | CG15548 | 33483bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgaacctgcacggattattggcattaagtaagccagccagataattatgcaaatttcagattcagcttcagccattttggagctccaccattaaagacctgctttttggccaacaccccaactaattgcccaacgtcggctacaaattcctcactcgattgtctgcagaaaacaaattgcgcctggcaaataaataatgcatggttaaagcgacggggattcaggggtaacatgcaaatgatggcgggctctttctacctgcaaatcactttgagttattgtatttagccttcaacgtttcccggcaaagtagaataaatattttaaagcctcgcgccgtctcacctgcaaaaggtgtccaacagccacgcactttgggcgatgattgatatggctttttgggggaaatggaagacggtcggctcccgggggacgacaattccccttttcaaacacagaaaacgtcgagtgtcaaagtttttgtgcgcgcttagcgcatttgatgaattgttaaaagaaaatcgcgcgtatgtgtaaacattctggtctagaaattcgaaggggctggaaccttatgaatgtgtgtgtgaaaatcaactgtactaccaccagccgctatgggggaaaaagtctggcgaagcttttgaagccgccgacgagcaaatggcggaagcccaaacagctgctgatgatgatggcggttgctgtcggtaaacagaaagaaatgagtgggtaacattgcgggagcactgactggttaataccctttgtccgcaggcatcgaagattacccacaaatgtcaacaaaataaattcgacgacatttaagcccagcgagtgttatttgaaggttgctaattgagttaccctactctcccattcatcaggtaagcactttaaataattaaatggccaattgctggcacgcgagtggacaaaggtctttcattacttttaataatttagtattttagcagctttagccaactggaatcaagtagattaaacagccattgggaaatgacgtgacatttacccaatgaatatgaaatataaatacttatacactcaatcggagctaaatttaaagccaagaaaattgcttgtgtaaagattggaactgacaagtttccggattaaaataagtagagcaggtgaatcattgccaaagttcttgtgagttttaccttggcaaatcctaaggtaattttcgtaatgagtcactcgcccagacatttctatgctaatgcagctaaaattagcatgaaatgtgtatttacttagtgctggtcataggattatttgtggctcagtaagggtatgcccattcagatagcaggaagcaaaacttttcgcaggcccttcacttttaatctgccttagaccgaccaatacacacacacgagcctgggcaaatgaatatatgcatatgtgggctgtcattgccttaaagagacaggatccccgggattcctggtatttgcttggattctgcgtgggcacctaatcctcgccagagaagccacatttggctgggcgggaaatggagcgacactatacacatcaaatcatcaatcacatgctttggtgattcattgataagccctccccatcgaagccctccaaggactccgcatgcggtcctcgtggcaatcatgttaataatgccgcaagatgtcggccagccattagccttcgccattaggccctccactctcccctttccaccttcccacctattccatttccctttcccttttctgacggcaattaatttaaagagctttaaagcaagagaaatgaaatgcagagaatgggactttgtttattttgattttggaaatcaattttgaatttgttgtttatttttgatgtggttatccggccagcagccactggcgtgtaaacaaatcgagcgctttttttcgcagatgccacgaacagacaggctctgctttttgtgtgtttgtgcgtgcctcgcggaatatatataaatataaaaactatataaaaggcaaatattcatgcggaaaatatacgtatgtatgtatgctgcgtattcgtatatatcatgaagccgcgtatgtgtgtgtgcctgcgccatta
PCR verification status
Line verified as correct.