Fly Enhancers @ Stark Lab

ID Coordinates Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT62063 chrX 14920528–14922665 (2137 bp) hiw, be activityactivityactivityactivityactivityactivity
active
head mesoderm AISN, mesoderm AISN, head mesoderm anlage VDRC

Annotations

stageannotation termintensity
4-6posterior endoderm AISN3
4-6anterior endoderm AISN3
4-6head mesoderm AISN4
4-6mesoderm AISN4
7-8posterior endoderm anlage3
7-8anterior endoderm anlage3
7-8head mesoderm anlage4
7-8trunk mesoderm anlage broad4
9-10head mesoderm anlage3
9-10mesectoderm anlage3
9-10trunk mesoderm anlage3
11-12ventral midline3
11-12trunk mesoderm primordium3
13-14somatic muscle4
15-16somatic muscle3
15-16ubiquitous2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0030600hiwoverlapping BDGP FlyBase iFly
FBgn0052594beoverlapping BDGP FlyBase
FBgn0000535eag16507bp downstream BDGP FlyBase
FBgn0030603CG554117613bp upstream BDGP FlyBase
FBgn0030605CG554837286bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgcacatagagatttatttgagcaggggaatgaatacatacaattcgaaattgattttgttatttattaagccaatatgtttagaatacaaatcagagggccgttccaagaactaaatcagtaatcaataatccaaatgctccacttttccgctctgcatatacatatgtatatactacatatgcacatgtatgtatatatagaaaagacatatgacctaagcgtgttttgtgcgctccaattcaaaaatatatatcttttagttttataatagatgcagatatgccttatatcgctctccaagtcattggattctgcacttcctcagcaattgagtgaacttagatgatttttccagcggatgtgggtgacactttacccaccccctcgctccgccacttatcgcttctttgtgaacgattggttttgagtatgtatgccgcatgtgtcgtcatcttatatgcatatacaggaatcgtatttatttatttgctgaaagtgaacaaacagaagccgaaagcgaaggaaaaaaaaaaccgagacaactgctcaaaacaaaagtattcaatctatagacagtaaaaaagaccgctgcactgtgagaaaaatgtacatcaacttggccacaattgcaagtgctttatttttctagtaaataagaaaactgcaatattttccaacattttctagctgtacaaagaaaacggaatttatgttgggcgcttattttggtttcgagtgtttctgctttagtggaatgcgcctacttaaattcccatttcgaatggctacttaaactacttggaactacttggaactacttggaatgttatggctgtgagctgctaaaaatctatcaattgccacaaattgaatgctcgtcccacaaaaacaacaataaaccagcaacaaagtgagacgacaaggaaaatcggaaaagaggagtgtaaatgcaatgagccgaacactcaaaatcagaagatagcgctctaggaggtacatatctgaatgtgcaccaactaaagatacagatacaaaaatagtgaggagaactgtgcacactatagaattttgcaaatattttcgttaaacaactttcgattgtttacacaacccacagccacggaaaccgagttatacatttcgatatggaaatggacactgaatcattcacaaaacatatgcacttaatcgataaaatacatatgtatatatagcccaccaagtcatttgagagagaaaaccaaaagttaaatcttatcttgtcattctcgcctaatttatacaatatttgtattcggggtagaaaattcatatgatgtaaaaaaaaaaaaaataaaaaaaaaatgaagatgagggaagggagatttatactcataacaactcataatacgataaacaaagttagttgtaaaatgtaaatgtaatgtagtaaatgttgtttataatccacattattcgatgcaattggtaaacagaaggatattccagagattcgatcgaccgaataaacattttcgcagtacattttgattagaagggagtgccgtttgctgcacttcagatgaccaaaacattttggaaaatgcggtactacagagaagaaaacatttgacttcatcgctgtttcatgttatctaagtatttcctgatagccttagtcgaaaactgaggtagtctcttatccgaggattatgattaatcggaaaagaaacgaattctttgccagcgagtcacgtagtcgtagttttccaaacgaacgtgtcaagattgcattatctcgcatatacaatacatacagatatcacacatcagatgcactcgctgcagggcatgtgtgccctgggaaatgctttgggaaagtcctttcttttcctcccattttgcagccatgtgaccagcatgccattggaatttcggttttcggttttcagttttcttggccgcacaaaatatataaagaaatgaagagatatagatacagatactgaaagagagcgagaggtggatcataatttatttttaattggctttgttcggttatttatgttctgctgttggttttggcacttccaaccaggcgacggcagctatttccgcttgtctgccacgcctttcgcccaccgaccatcgtatct

PCR verification status

Line verified as correct.

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