Fly Enhancers @ Stark Lab

ID Coordinates Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT7358 chr2L 14404234–14406337 (2103 bp) elB, CR44733 activityactivityactivityactivityactivityactivity
active
midgut chamber, midgut subset, head subset VDRC

Annotations

stageannotation termintensity
4-6anterior endoderm AISN2
4-6amnioserosa AISN subset2
7-8not active0
9-10not active0
11-12brain primordium subset2
11-12ventral nerve cord primordium subset2
11-12posterior midgut primordium2
13-14ventral nerve cord subset1
13-14brain subset1
13-14midgut subset3
15-16head subset3
15-16ventral nerve cord subset1
15-16telson subset3
15-16midgut chamber4
15-16brain subset1
15-16midgut interstitial cell3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004858elBoverlapping BDGP FlyBase iFly
FBgn0265946CR447335521bp upstream BDGP FlyBase
FBgn0264810Pburs12495bp upstream BDGP FlyBase
FBgn0028871Cpr35B20081bp upstream BDGP FlyBase
FBgn0020258ppk23063bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

ccatttgaaacccatttaattttcagcagattaccagagcattaagaatgccgccgtaacggtcaagcgtttcccctggacatttgggaattatgggattttttgtttcactcggtgcctcggctttaaaaccaatttgggaaaatgtgtaaggtaaaccatgttgtcacatggcgacgccataagcaagtgcacggacataattaaggtcgttatgggggatgcaagtgacgaaaccttttaaacgaaatcttttttaagtagcaataaatacattttaaatattgattcatgtatattgcgtacatttcttttgcatttcaaaataacacgaaagtattgcatataacgtatactttaaacttggcgcaacccgtttagtcgtacaattaagtttgtgacacatctcatgatgctgttaatggcgatgatgataatgcaattgacagttatcagcgggcacattaatttgattacttctatatgaatttattggttaatttgttggagcccccttttgctggccacccccttccaccaaatcgattatctcgggccataatttgtaatgccgcgacttaactctatggagaaaaaaaaaaaatacataaaaaacgggttattattttgcggtttaagcgtcgattgcaattcattatcatagttgccgcctcgcgtgcatttaaatgaattcattgagtttcacccattcaatttgtacatacgcaagcatttagctttcaaaatgatatttgccatgaatggttatgactatggttttgaattgaaggtggggttttcggaggtgttgccagcacgattggatggggccgagttttaactgataaatgccgtttaattgttaccctaaacggcaataatattgtttgtccgaatcggaaatactgcgttggacgctgctgttcgagttttattgctctttctatttcttactcgatatttatagttgcttattaacgaaattggatcgttaaatttatggtctcaccataaaatgtcataaatttattaatgatctgccgcagatatcgatccagtgactatatactttttttttaagtctgttcctaatcggtttcttatcgctccgcaaacccaagtgttttccagataatctatatgaaattcagtccaattgcaatttcaacaggctaagctattgttagacagatcgattgattgatttgttggaatttattgtgcattttgatttgattagggtacagtacatgatgcataaatgtgactaatgctttatttataaacgctgataagaggcagtctaaaaatgaaatgatccgtttacttcaggcgggattttatcgacttcctgaatttttttcatactattaaacgatcattgttattatttaggcttaggaaaatgtatacacctcgtgtaaattgacttttaacccagcccaaccccaattagagtgccatagcaatttcgctgtacatcttgtatctcgcttgtctgtctcgcatttcacatatttaaaatgttccaagaattaattaacactttggacaaaaactattatttgtgtgcgagtacaaaaaattaacatgacagctctagacatggcaatttatcaccggcataacacgttggagcaactctgctcgactcatttgttgtagcctgtagccaggcatttcagctgttgatgacactttaattagagccacacgcaagcacaaagcccaaagaatggcccattgggggcgaaaattcgcaggggaaaggcctgagacggagccgttatgtcaagcgcacactttaactgccagatccgaccagttgtgttgggtttatttggtggcccaaaccaaaccaaaccaaaccaaaccgtacgctgccaagcagcctgtggttaactgaaatgaacgtcggactgcataaatggccgcttgactgacacatttaattatattaatgatgtttgcggtcagctgacatttgcactttatttacctttttctgctgctctgtcagtttaactgtctgtctgtccgactgactgactgactgactggtcttgagctcatgttaagctctgacatgagcccgcgcaaactg

PCR verification status

Line verified as correct.

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