Fly Enhancers @ Stark Lab

ID Coordinates Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT58723 chrX 8248525–8250736 (2211 bp) nAChRalpha3, CG43695 activityactivityactivityactivityactivityactivity
active
antenno-maxillary-labial complex, anterior endoderm anlage, posterior spiracle VDRC

Annotations

stageannotation termintensity
4-6anterior endoderm AISN2
7-8anterior endoderm anlage3
9-10mesectoderm anlage1
11-12ventral midline1
13-14antenno-maxillary-labial complex3
13-14posterior spiracle3
15-16antenno-maxillary-labial complex5
15-16lateral epidermis subset3
15-16ventral epidermis subset3
15-16head epidermis subset3
15-16dorsal epidermis subset3
15-16posterior spiracle3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0015519nAChRalpha3overlapping BDGP FlyBase
FBgn0263778CG4369529304bp downstream BDGP FlyBase
FBgn0030033CG138731289bp upstream BDGP FlyBase
FBgn0040928CG1534542665bp upstream BDGP FlyBase
FBgn0030034CG1055544448bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gtcacctgaacgacggtgcacgaaggcaagacacaatgccaaagtaaataaaaatccaaactaaattgatttttttttttagaatacacttaaagaacttatgcaccttgaaacacaaattatgtgttaaaagaatttaataattaaatatatacatacatattcgattgaatagtggatcgtgtttgtataaaactagctttttaatatctgtacgtttattatttcaacactaagcgtatattccttgcgcttgatttttgttattttttttctggggaattttcatcgaaaacacagcgtattttggtgcaacgtgccacgcccagatgataccacaagcggctattgttgttgtcatactttccttttaatttatcagcatatgaaaatctgcaactgcaactgaaagcgacgttgcagcagctggaaagcgacaaccccctcccacccccctcgaattgcagattttccatgcaaatttaggtttgtttggctcggtcagtagtggcatacagcattttccaaggatggccaccacaaaacttggcaatttgatctggataaatggcgctcagtcaaagggaagagtttcgctttccttccctttctatccattcttttggttttttttttttttttgtcttaaaccatttttcattttcggtgcgcgctgacagtttccctggagaaaacgaaagtgaaagtgaaagtaggtggggttgcttcaaaattcaacaagagaaatgcgtgagcggcaaatgagtcgcacctgggaaatgggggaaagcggtgaaagtcagtgtgaataaatgcatgaaatgaatgagtaaatagctcgaatgactaactgcggcattttccacccaagacattttccacccaccattgttcggggcatttgctcgatttactaaattactaggaccaggatgccaggatggtgtcgacaaccagtcggcaagatagagataaatccagatgtacatggagtaattggggctctggacgagttggttatcctgcgaaaaagggtccaagtcggaaaatggccaaataatttatggctaaatgtaatagcacttttatagttgtgtggccaattgattgaaactttagtgaattggtattttgtctatgcacacttggagaaataaagctgtgctttcacaaaaggatatgcaataattggaattagaatgaattgaataatattttaaggcatttggaatagtcagaaaaccaatgtttgctgcccaattaaatgggacgcgaattaaatacgaataaatatgaaaactttaccgaaatctcttccaagtcaaatcgtaatttaaatgcctgcaacatttctggccccataaaatgagcgtttgaatcaaccaaccgtgtgctgcccaacttttcccccacaacaaaacccccatcgaatatcatcttaataaatcagagattcttccacactaaccagtataatctggcaattcagctgatcccagaataaaactaatatccctggctttttccaacacaacatttggctgggcgaaaaaaccaccccgccccctccaagcaaatggtgcgttcaaaaacaaaaaaaaaaaaaaggaatgcgaatagggaaaggaaaaaggtgtgaaaattctgggaacacacagcaatcggagagaaggacgtgcgtgcaagtgagatagtggatggaatgtcctttggcattcgaaaatggcattatcaaaatttacatacacgcatatcctgattatcccttaagcatgaattattgaaagcgtaaataccaaaacacggccgacagtcgacagccgagagaaggaatataaacaacaacaacaacaacaacaacagcaacaaaggcagtaacaacaacaacaatgagagattcgggacaacaatgcgacagaagttcctcgtgagtggctttttagggatgctgataatgataatgataatgattatgatgctgatgatgacgatgtgtagagcaagttacatccaaggatggggcaaactcagccagacgacggcttaattttcacatgacaaacaaaaaaagacaagctgagtggagacattttgaatggcaactcaagctaaataagacaacaaatttcacacacacacaaaaaaaaaacaataaaaatatgaaaaaaaaagctgaaacagaaacaggttgagtgcggattctaaagtgggc

PCR verification status

Line verified as correct.

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