Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT9687 chr2L 18910914–18913266 (2352 bp) CR44738, ssp3 activityactivityactivityactivityactivityactivity
active
amnioserosa, crystal cell primordium, crystal cell VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head subset1
9-10posterior midgut anlage1
11-12head subset1
11-12posterior midgut primordium1
11-12crystal cell primordium2
13-14amnioserosa2
13-14midgut broad1
13-14crystal cell2
15-16amnioserosa3
15-16midgut broad1
15-16crystal cell2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265951CR447384168bp downstream BDGP FlyBase
FBgn0032723ssp35433bp upstream BDGP FlyBase
FBgn0265952CR4473910421bp downstream BDGP FlyBase
FBgn0265950CR4473714117bp downstream BDGP FlyBase
FBgn0003896tup29654bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

ctatgcgcttacatatctgagagtttgatgtctatataaagtataggatattgtaagattttcctggtcttcttgatatcttttaatattactggacagtgaagactatgctataatggaagatccagcccgtcatctggataagccaaatacttttggctgctctctttttattgtttttgaagccagcgcataaagtggaaattatattgctggaaaaaaaaagaggcgaatcgacggagaataacttccagcaaatgcaaataacgcaaaagttgctcgagggcagagaggcggaagtgggcggggttctgccgaaggggttgtggtctgcgcccagaagtgtgggcgtggcatgccactgccactgccacagccgctgcatggatttcgatgattaaatgcaaacacgcaaatatgacgagcgactgacagacaggcggactgactgactgactgtctataccatcgcatttgttttcgagtgtgcgtctgtttgccgactgccaactgtcttcaaatatgtaaaaatacgtatcgtatgtgggcaaaagaatgggaataaataaaagttggcattaataatttatgcaatattgtacaatgtacatatccgaacgcatatctgcatgcgagaccgaaaatatgtatctccgagatagcacatgatgaaaatggaatgccttacaacatacagtttttctgaaccccatttccgccctccaccaggatatggcatctctttgccgcttcaatttgaaaattcaacaaatgctgtcaacgcttttgccccaagcagacaccactcaaaataaaaaggacataaaacccatctcgtataaaagctctcttcttaagttaaataaaaatcataaagtgtaaattagtatcataagatagtatacaagttcctgtctttagttttaggaatatgtatcatatcgtatcatatatgcttgcaaaagatatttcatattccacactactagttgcttgctatattttcattctgaacttgtaatattttgccagttcattcttgccattcaaccggtagtcgtatctttgactatcttatcgagtgcgccccacaacatatgctatatattcgagaacgatatgcgatatgaggcaggcgcgagtgcgggtaaaacgcgtttaattaaccacttacatggttttaatttatctccctgctgcactcgaaaaaaaaaacaaaaaaaaaactgaaaccgcacggaagtgctgcgataaagatttagctacaacaaattggtgttatctccggtggcgggcttatcgagacagcagagatacctaggccacatggcagtgatttatggccagaaaactgtcatgatttttcccccgcatcccaccgcttgccccaccgcttttccctgaccccaaactagtttttcgagtgtggcattttggcatcaaacaaacattttcgccgttcatttgtcgagtcgagtcgagttttatttatgcatatttaatatttatcaatatgaactgcgcccgatacataaatatacacatatataaaaacacgtcggtggaatgggcttccttctgctgggttctctttcggttctctggctggttattgaaacaaaagagagtgacaaaatttatagccatattatttgttatttatttaagctataaatatgcatatgaaatgaatgaatgctagcagcaggtttttttttaccataccctagaggctagcttacggatactgactggtggacatgatggaactctacagggaaccacaaatagtaaattatgtataaaaaaattacaaaatccctattgagtaaatacaagtaaatcgtgagaaagaagccaagacaataatatgaatgaataactatagttaattttatcattattttaactgtatccgataagagtttgttccataaatcacaaaaatacaatttacctatttggggtaacaccacaaataattaccgtaaatagcatatttttccaaggtactcttatcttcgttttaatctcgttttggttatgtgggggtttttcggtggatgtccccctgccgccatctctttcgccgtccttcgctctatctctttcagacttcgactgccactggtttttctgctgcgttatttatgtggtcataaatttggagctgaaagcaaagctccgagaaaatggttcggggactaatagttgcacaaacacacagatccttttcgctgcgttcggatagtaacagttgaacacagagataatggtgaacttttctgtatgatctgtatataatctaaatttgatcctagcgatcagtagagagagcgctatagtcgaatac

PCR verification status

Line verified as correct.

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