Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT0131 chr2L 285217–287380 (2163 bp) CG3625, CG11601 activityactivityactivityactivityactivityactivity
active
midgut broad, brain broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12brain primordium broad1
11-12ubiquitous1
11-12ventral nerve cord primordium broad1
13-14midgut broad2
13-14brain broad2
13-14ubiquitous1
13-14ventral nerve cord broad2
15-16brain broad2
15-16ubiquitous1
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0031245CG3625overlapping BDGP FlyBase
FBgn0031244CG116011949bp downstream BDGP FlyBase
FBgn0025686Amnionless2035bp upstream BDGP FlyBase
FBgn0003444smo3051bp downstream BDGP FlyBase iFly
FBgn0086855CG170786984bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gcgaaagttctccatataagatcttcaaaaagctctaacttttatacactggagaccttgacaaatcctcttcatcactcaagaaaagcccatgattctaactactgtcctattcattttctctgtgtatcttaatagatgcgtgcgtacaagtaacaatcggagtgaactttaaaccacgctgcgttcgtgattctaatgggagatggatattaccgcatccaggaacgttaggtatttgaatttgcccccccagggatgatggatcctcatctctggctcgctggtggggaactgcacgtagttgtagtcgtaatagatgccgtagccaaattgcacgactgccgtcaggtggagcagggtcctcagagccccgtagacgccctggtacacggagttgcctcgcacggatgccattttcctgctgcagctgctctgctctcgattgatttttcacggcaccaaaacacaaacaaaccggtctggtctgtcgctccgaaagtactactgcttgcgagtcggaaccaccccaaaaaaaggggcgagcggtggaacagtgtgcccgagccgaagcagggccgcaataccaggtgttcggatatacacatatatgtatgtacccccttgtagggttgtaagctacatcgagatttaatatgagctaaagttttaacattttgattgtgggctgaatacatctgtgaagatgtggattcattttaaattgtgactagctttgttgaatttgtatgaattttttgtttttaatttataaattcgtgatgtaattttatgaaaatattattttcttcaaaaccattcagaaattgatgttgaagtcaattctttgacgataatcatgaacgaaatctaaaatattcactctcgtctaccgtatgaagccacatatcattcaggttgtatcaaaatacattgttctaggccaaaggtatctttactgactacaagcgattagatttgagtgtatgggatcgaactagaacatcagaccattacaaatcaaaaaccagttatgcatcgccttcgtttaaccggtgtagagattttcgatatgaacgcatcggcttaccgcacaaataaaagttaggaacttaaattttccgccgaagggcaccgtgttgggcatgtcgagtgtgtggaagatgtacacgccatagttgaactgcagcacggctgtaaaatggaggagcaactgcaccgccttgttaaaacccggcgaagtggaacctttgctagtcgattttgacttgggcttggccatgttgaatctcctggtgccagatatgtactgattgtggagtagccagagtccagtcactagcagcaaggaatatacgattgcatacagtagtcactcactaagcacacctccaaacaatcgtgaaactcttcaaagtattgctacaacatgctcgactgttcactgtatgtattttcgctttcgctttgaaactgataaggtgcgcttatcacccgcactctcaatcgccgtagtacaaagtatttccacttcagaatgaattggcagaagctaaaatgaaatccgaaagcggtcgcttaatccgcatcggtacgcctccgtcccacgtccctagatccgtgcatatctacggattcatatcctatggcaactgggggaggcacgtgccttcccaagcgtgtctatgaatagatacggatacacatgagccacatttatgagccgggggacaaaggcttctggaaatatcttcgcagctaatggcaactatcgtttcccggtcccatcaccaccaatccaccccctgtgaaggtcaaggaacaaggccatcgcgacaaaaggcaccgctaactgaattacctggtaaaattatcaggtgctctcttggttctttgccctttcgttacacgcgatgcatcgattgtgcgttagtaattgattcactgaacaataatatccgaaaatattcacgcagatccgcctacaacttgtaaatagagttaattactggaccatctgcgcccaggaacatttataatgtaatcataacaaatactttaataagcagatctattaatatacatatatagaacacacaatcttaaaattgtacatcagattatacgtgatgctccattggtgctttcgaatcaggtttctatg

PCR verification status

Line verified as correct.

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