| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT1085 | chr2L 2166885–2169009 (2124 bp) | aop, CG15382 |
      active |
epipharynx, midgut broad, hypopharynx | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | head subset | 2 |
| 9-10 | posterior midgut anlage | 1 |
| 11-12 | head subset | 2 |
| 11-12 | malpighian tubule primordium | 2 |
| 11-12 | foregut primordium | 2 |
| 13-14 | epipharynx | 3 |
| 13-14 | midgut broad | 3 |
| 13-14 | malpighian tubule | 2 |
| 13-14 | hypopharynx | 3 |
| 13-14 | clypeolabrum | 3 |
| 15-16 | midgut chamber | 2 |
| 15-16 | foregut | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000097 | aop | overlapping | BDGP FlyBase iFly |
| FBgn0031393 | CG15382 | 10096bp downstream | BDGP FlyBase |
| FBgn0031392 | AIF | 11497bp downstream | BDGP FlyBase |
| FBgn0265017 | CR43751 | 15077bp upstream | BDGP FlyBase |
| FBgn0027509 | CG7261 | 15222bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
cggcttgaagtcgttgtttttgttccttttttttcttattttctacctcttttttgtggaactctttctgctgcctcattgttcatctttatgtgctcgtcggctcttcgaaggggcagagagatggactgcctaatgatatcaaacgttcgataacctcttcgaatttcttataaatatgcaaactcgaaccgcagcacaaacaacacacacctctccgctatgctgatcattctcatgactggggagatatccgacttcataaagaccattggaacaatcggaaaacaaagggcgcaaaagcacagcatcatcattgcgatcattatcataatgcttatgatcgaatcggtagctaactacctaggaataaaaagcagcacacagatggagggcgagagatgctgtagatctccagtcagatatttcatttccatacgatggatgagttcatcaaacgcccagacaagagttcagaatcattcctgtttttgctctcagaaggggttgatgatggatggagagttttagatgcactgagggaataaaagcaaaatcttttgattcctaggtcactcttttgcccatgataacagatagtaaccacgaattctccagacaatagtgattcccccattttttcgagtgtattcagagtgtttgctggtgaggagctgaatgctcatagacctagaccgcatcaaccgcatcatttgtgcccattacattcaattagtcgcatctgcgtttttgtttcaactctttgcgattttctcgcacttgcatcaatcttctctgcccctcccaccctcttcaatgctgttcctgcccaccatcctaacttaataaggcactcatcaacatcatcatcatcattgttggactgctgcctgcagcaagaattttatgcttgccccaagctggcggggatgccaacgaggggcagtggacatctcatgtgcgtctctttggctgggggtcggggtcagtacgggttcaattgagttggttgacatgagtagcttccgtgtttgaagaccagcacatactttcgagtagagtttacatgaagcaacgaaggacaatgcagagaactcagaaaactttgtaattaggtgagtgaataactatttcatttcacaggtcattcattttcgaagagcatcactgaaccactcagaagccacccatcaacacaatcttctggtggctcttcgacttaaggaaccttgtccatcaagctgataacatccacagtcgcagttgagtctcaattccaattccagttccagatcccgtcctcggagcacacctgctgcggaggcctttggcgcttcacatggcgatatatatctgttaactaggattacttgttgtcttgggtgtcgcggctctgataaagaccaacagaaatagacagaacacataaaagatacaacatgttccgctatccgttgtcgcacacttccaccataatgtttatatgtattatgaaatgtttacgatttgcttgagtttcagtaagttcataacaaatatgccccctccgcagataagataacgcatagatacatagagcaatctgacttggctcgacttcagtctttcggactccccttcactttttattgctcgcaactgacttcccatcgaagaaagacttttagcgacttcctgctccggtggtttgactattgatcggcctgatctttaagcttcctgtgggcaattggatcgtggtccagcgaaaagccacctagctaagccacctacactgcgatgaaagccattcttggttcaagatttgaatgttctcaacgcaagaatctttccggatgagaacgtgcaatatcgtacttaaatgtgcttagatcttcaactttcttccgcatccacgatcatagtcccgatcttaagccaaatttttctgtgtgcaataagtgatcgctagctgactcgatcgcccgtccatttcttcatttttttttttttgtgcacacaatctggccgggcatctaaaccggtagttagtatttgcactagtaatcaagcacatacatagctagcatctaggcatgcatggcgaagccgcttcctccccttcctcacctcccacctccgccag
PCR verification status
Line verified as correct.