| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT11145 | chr2L 21843469–21845803 (2334 bp) | tsh, CR44917 |
      active |
somatic muscle, trunk mesoderm anlage broad, trunk mesoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | gap | 3 |
| 4-6 | posterior | 3 |
| 7-8 | trunk mesoderm anlage broad | 4 |
| 9-10 | trunk mesoderm anlage | 4 |
| 9-10 | hindgut anlage | 2 |
| 9-10 | clypeolabrum anlage | 2 |
| 11-12 | head subset | 4 |
| 11-12 | clypeo-labral primordium | 4 |
| 11-12 | trunk mesoderm primordium | 4 |
| 11-12 | somatic muscle primordium | 4 |
| 13-14 | head epidermis ventral subset | 4 |
| 13-14 | dorsal vessel | 4 |
| 13-14 | somatic muscle | 5 |
| 13-14 | clypeolabrum | 4 |
| 15-16 | head subset | 3 |
| 15-16 | dorsal vessel | 3 |
| 15-16 | midgut chamber | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003866 | tsh | 6459bp downstream | BDGP FlyBase iFly |
| FBgn0266222 | CR44917 | 11625bp upstream | BDGP FlyBase |
| FBgn0266021 | CR44786 | 21157bp downstream | BDGP FlyBase |
| FBgn0266223 | CR44918 | 21477bp upstream | BDGP FlyBase |
| FBgn0266224 | CR44919 | 23385bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cagaacggcaggaggctgttttccaaaacggaaagcgacgccaaacgaaggcacaccgcagcgaagtgaagcgagagaaaaacgaatttttcgtctatttcgatggcaataattcaaaatatgaagacggctcgatagtcataaatctgtcaaaaatccatttctttcattttatcccaaaagcagcaccgcctggcgtttccttgcctttattgtgtgagcgcgcctgcttgctaagcgtatctttcagatacacaaactggcacttcaaaaacgggcagagggaaaagaaaatgaaatagtgtccgcctgtcgccgtctcttttgggttctgttttcaaaagatccacttgagccagcagactttcctccacccagtatgatttttccgaactacgaagacgagaagaaaacccatccatccaatcaactcgagctgaaacgcaactgaactgaaagtgcaccaaagtatctggtaagatgctcgtttgctcacttcaatccaaaagattccaaccctcccgccactcaaccagacccaagcagttcaagatgacggaaaacagccatcgcaccatatttcagtcaattagaactgtcataattcattcctcagagctattttgttttactgtgctgccgatcttgcttttgggttatttcctatgaacggcgcaataataatgctcgccctcatgatgagttccagtaaattcaaacattttcgatctccctgaacccaaaaaatataagaaaactgttgtaaatggctacgtataagcgcaaatgaaggaaggaatgttggagatggcggttcaccaagtggactctatgacgatgtgaaacagtatatccaattacggaaaaaggtaaatataatataatataaatataatatagttaaatgcatcgactgtgaaatacctattgcacagcacatcaagcatacatgagtatatgtatgtatatgtacatatgtggtactatgtatatatgtatgttcctatctactggccatgaccaagccttgcccttcgatccgaaacttgatgaactgaattacatttgactctgactcatctctaactacatgtgctcttgtggtaatcctgcccaagttcattttcaaaattaaaacataattaatgcaagttcttttagttaaattacgtttactctagaacccctccctacactacatattacaaatatttgaattaccactgtattatcgcttccactctctgtggggaagtcaattatatgaaactattaaagttgccacgcgtatcgccctcatataatccagctcgctgcataattcatgtggctccaacttactttaatacccttccatccatctattgtatacccccaatggctgcctccactttccgtctacaacaaggactggctatcgaaattgatgccgccaattaacaggcgttgaaaaacatttcgaccaaattgcataagcctcaggacggaacataaactgctgtgtcgcgggatctggcagtgggtggtggcagatgaacacccctcagtcacggttctccacatcgaaaccacacgcatatcagcactccaaacatccgacacaatccgatgttgattaccacataaaaatccagcaaaaggacctgactccttccgtccacttgcctgggtcaacaatttttgattgcctttctgtgtgagcaagcgcggcgtgaaaattattcctaaaacaaatacaaattcatttgagtggatttcaactgcgacaccaccgctaccccgcgaccactctaccacgctgccccgcgccgtgcccgcaaatccttttggtcctctttgcagtgcattttatgcgttgcgccagctaatgggcaacgctctatgccgccgacgctgatgattgtcctgcaatttgtgtcctgaccgaatcgaactgcccggcttggggacttgggatgcaggaatgggggaatgggggcacggagttcgggtgacgcgggtgttgtggggccactttgctgcccgatgcgtgcgtgctggaaattgtcgctgttattgccttttcgaaaaattattccgcgttaatggcaattaccacttatgtatgccccggctgcagtgctttggtcctgctgcgatgcccttccccgtcctccgcctcgtctcatgcgcgaatgcaactcggaattattttgaaagaaatgatttccagttaatttatgttaagtgtagttaagtgaaaattgtgtttgaaaattagccaaacgcatggcgtggtttatgcggcaactcaattagctatactgctctaatgctgcaagtacagtacgcggct
PCR verification status
Line verified as correct.