Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT11148 chr2L 21848927–21851083 (2156 bp) CR44917, tsh activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, ventral nerve cord primordium subset, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12ventral nerve cord primordium subset3
13-14ventral nerve cord subset3
15-16brain broad1
15-16anterior ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266222CR449176167bp upstream BDGP FlyBase
FBgn0003866tsh11917bp downstream BDGP FlyBase iFly
FBgn0266223CR4491816019bp upstream BDGP FlyBase
FBgn0266224CR4491917927bp upstream BDGP FlyBase
FBgn0266225CR4492021029bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

caatgggacttgcaacctgccgctgccggggagttccagataaaattaacttgtcactgtgatcgcaggtaaatcagttccttttatgtgtaaaggattttcatttgtatctggcatctttgcccgtccccatcttttcgctgaaggttaacttttcgatagcgagatgctacaaaagacttattaatagctatattaaatcagcgataaaagggagaccattttttccttaccgttgccagtttaagtggagttgctgggccttgtgtaggatctatatctcattcagagggtccatcccttggatacatcaaagtttctcagattaggcaaccgaataattttcgagaggtcaagaatttttggaaaagatattttataatgatattttattaatgattgtaactaagagttcaactagcatcgacgtccctttcgcccttcgacctgccgttatgcgtaagccatgcaagtgatgacgtctgtgaaaagggccagaaaaaatggcttaatttggttacacatctttaaatgacatgaaatatggaagtgcagcaaacaaaacaaaacccggaacgggcaaaaacaacggccagtaaaataataatggcaaaaaggggaagccgaaagatagtcgcgttcacagcggcagaatcatctaaaaatctgtgacgcaataaaatagaattaatggaaccggaattatgcgactcttttggggcaacattcacagacagacagatttggaatgggatcgggacaggacagtgtccaatggtatatatgtatgtgtgtgcctgtcgcatctaatattaataaatatcttcaatctgctgtcacaaagtgcaaaatagttatggtacgatacgcaattaaaatatggctaaaaaccaaatgagaaaaaacaagggccagaggagagcggtggaacgaagtggcggagagtacaaatacccctgacaggtaataaaagtaatttatgcgcgctaagggttgtaaatgcgacatcaggaggtggttgcggattggagttggaaatgaacgaaaacacccagcgctcgttttaatgctgatgacgatgacacgacgccagcgcagcagtaaggacattcccttccccccaaaactcatgccccgtttccatatttcatgctcgctatcaaagatcacaaatcaaattattataccgtgtgatggccccggcatagcggtatttagtctatctatgtatattggatggaatggctgttaagcagcaaccacccagcagacggaagtgcaagaaatgtctaaaattactaaatatggtatgcctgaattatgagacttacaaatactcaaaaaagactggggaatatcgaaatgatcttgtgatatagactaaattaatttacaagtttaaccatccaaattatttgtttacgtgtgtggaaacaaagtttcaactgccacagaaatgtaataaaattttgcgttaaaattttcactagctgagtaactggtatctgatagtcggggaactggatcatagcattctctcttgtttttctttaaaaattgataataatctcgctagtttctattaatacgcaaaaactatttgttcactaatactctaacgcataaaatatctactttttattgcatggaagtgtaatatgtaagtcgcaaatgatcgaatcggacaactggatatcgttgccatagaaataatcggaaaataaatggaaaataaaatgtacttatgttgtctttattcataatgtggttcaccagtttcttgactacatgttatttcgatttggaattaatcaaaataggacgattatatcgtgtagaatggtgtcacatagtatggttgttttatattgtcaaatttttttatttcgttataaccaagttttattttgaatgaacttccttgcttttggttgatttaatcttaatgcgaatttgctgcagcttgatggtttcaaaaaacaaaaaaaaaaaaatactgaatgatttcaataatattagttagggttgtgtgcggttgtgttcagaaatcgaatttattttgtttgtttggcacaattttaaaaaatattctgtcattgatagaaccagaagtaaaacgaataaagtgttattttgatgtgtgctcatctcgatgcc

PCR verification status

Line verified as correct.

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