Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT12431 chr2R 2001448–2003519 (2071 bp) EcR, CG14589 activityactivityactivityactivityactivityactivity
active
yolk, amnioserosa anlage, amnioserosa VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10yolk3
9-10amnioserosa anlage3
11-12amnioserosa3
11-12yolk3
13-14yolk2
15-16amnioserosa3
15-16midgut broad3
15-16yolk3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0000546EcRoverlapping BDGP FlyBase iFly
FBgn0033063CG1458923360bp upstream BDGP FlyBase
FBgn0011958tRNA:R2:42Ad28222bp upstream BDGP FlyBase
FBgn0033062Ars228319bp downstream BDGP FlyBase iFly
FBgn0011891tRNA:K2:42Ae28429bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgtaatgtccctttcctcgccttctacttgaccacgatatatagttacatatgtatgtatgtatatcaactttggtatattttttgcaggtcggtgagcgttttattcaagtacgctcggcagttttttcgccggtgcgaatcgaaaataattgcttgaccgtgcgaactcgatttatattcaccaacaagtgaacacggcaacaaaagcatcgaattcgcggcttataaaattggtaacagcaacaacaaacaagcctaattctaaaacaaaaataattaaagcaaccgcatcaccatgtaattttaataatatttcctgatatcaatgttgaaaggcgtttgaatcaaaaaatttaacaaaaagcagaaaagtggtgaagtcctacaccgaacgcggtgcaaaaagtaaaaagaaagtacgcagctaccaacttttggcgtgggtggttgccaattgcaattacccagtagtttcttaattgctccaccgcacttcacttggctccagtgcgtttatcgtcataaatgtacaaagtatccacacacgcacaagtaaaagtgcctgaaactgtgtcaggtctaaccgcaggcattatttgtcggctaaagattgaaggctgctccgtcctaagccaggtccaaaactgagagattcgcgttacaaatttctttgattccatcgattgtctaggctaaggtgggtgttgctcgagctgctgttttttattttttgccgagctatagctgtttgatttttgaaggtttttgccaaaaaaaaaaaaaaacaaaaacaaaaaacggctaaacaaatacaagtaaagccgcaaaatgtgtacacataaaaaatgaaatgttaaataagcacgcacttatttgtctaaaaaaaattaaataaaataaaatgttacaaggttaagccccgacaacggcacgaatttattgtttaaattgaacaaacagaaattttagcacagaaatgaataatgagcgaaacaaaataatgcgaataattgggctaattgttgaccgatttttattcagttttcaaaatattataaaagttcagaaacggtcagctggtcagcttgtcgatttcgaaatggcgttatgaataattttttaaacacaaatgtggctgtcctagaaatcatttcattttgcagccgttatcacatattttttacctgcacaaaatgttaaatgtttactaaatcttcgacgtactacgagtagacaaaattgtccttccgctgaacccacttgagtgtagtagaaattccaactgatattttcgctttcacttgctttctcagaatttttagtgtgcactttccgtgcctgagccaatctgcgtttcagtctacgtattttcgcctattttctactacccgtactctcctagtcgccttatcttatcaggccgatggagctgaagaaaacacggggaacgatccagccgcggagcgtactgtattttgtttatattaggaacaagaaaaagagcagtgtttttatggcaaaataaatagcacaaatgtgcattatcagtcagtgctggtatctacaaagtgcctcacaccaacacgcatagggacacatacactctcgatccaccaacacacaggcactaaccccaatttgaactgaacgattgtggggcactgtgttatcaccaacgcccgaaaaatagacccaagcacaagcacacacacacacagacataccgctgaggaaaagaagcaaacaaagtgggcgaaagttgacagtcacctctccagctccaaccctcccccccaccgtactcgtactttctcgagtgctgccacttttggagggacccgaaaaagtgtattgggcaaaagatattgatttgcagcacgcaaataacgcatcaacctcaattacaagccactggacaactcgaagtgtaccctgccctgtccccaagttgaacgaactagctagcttggtgtttagtgcctgcgactaattaaaataattatggctgggacttccgcacttctcagcctgcagttttagtagccccgaagaccctgaacttgaacccag

PCR verification status

Line verified as correct.

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