| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT12441 | chr2R 2019503–2021604 (2101 bp) | EcR, CG14589 |
      active |
anterior endoderm anlage, hindgut anlage, ubiquitous | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | ubiquitous | 1 |
| 9-10 | anterior endoderm anlage | 3 |
| 9-10 | mesectoderm anlage | 1 |
| 9-10 | posterior midgut anlage | 2 |
| 9-10 | hindgut anlage | 3 |
| 11-12 | ubiquitous | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 11-12 | foregut primordium | 3 |
| 11-12 | salivary gland primordium | 3 |
| 13-14 | brain broad | 3 |
| 13-14 | hindgut | 2 |
| 13-14 | ubiquitous | 3 |
| 13-14 | ventral nerve cord broad | 3 |
| 13-14 | salivary gland | 3 |
| 15-16 | brain broad | 2 |
| 15-16 | hindgut | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000546 | EcR | overlapping | BDGP FlyBase iFly |
| FBgn0033063 | CG14589 | 5305bp upstream | BDGP FlyBase |
| FBgn0011958 | tRNA:R2:42Ad | 10167bp upstream | BDGP FlyBase |
| FBgn0011891 | tRNA:K2:42Ae | 10374bp upstream | BDGP FlyBase |
| FBgn0011938 | tRNA:N5:42Ah | 20605bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
acacgcacaccatggcgctaaaagagcgagagttaaaagcggaatcggcgctaaagataaatgtgaaacgcaggcagcactcactcacacagccacagacacacactctgagcaagcggcttgaatgaaaatgccgatgcaattgcaatcgtggaatactctttgtccgctctccggcacgtatctgtgagttgtgtgcgagcgtatatggccgtgtatgcgtgagtatgagtgccatcatcgctttcatttcttgctgctttattttcggttttctacatttatttattgtttttttttttcgttcgttttcgttcatcgctactttcgggtgcacaagtgcaaattcacacgtatgtacgtacatttgaaatattctcgcatagtgggacgaaagggtccataataaatcggaaggagtgccacaacttgcaataattaaaagtaggataagttgaaatatttagcttaaattacagtctctctacttcaccttttcgatacattccaagttttattttcaataatctctaacatcaattgcatttttcagtgtccctttaaactttattatttgaatacatatatgtagcaaatatctcaacaagaaaacaatgaaaacgtttcatgtggccaaaaatactttctcacgtcagctgaatgaataataaataagatcgagttagaaaaccatagagagtcctccgaaggactgttttccattcgttggaagggaaatccacctgaagtcagtagacaccgctgtttgaagcagaatattgacactacgagacgtaattgacggaaaggaaaaagatcaccaggagggtaaacagaacgcagatcaaactaacagccacaacagtatctatgagtatgtacgtatgtatacatacacatacacgtatcaccgccgtctgctgggcgacgtataaattgcacgtttcgaatacattgtggttaaaaagtcagcgcaaagcgagctgagatactcagatacagatacgcacacatcgctgcagataattgtttgcccatcccttccccccaccaccagccccatcattcgaatcgctacgtatttacttaacgtcgctgtgtgcgttgagttgacgctgggcaagttcaagtgtagaatgcaatagagaattgcatttgccagagcgagagagacgacctcgctctctacgcatacgcatagaaaagccggcaaaatgcaagggcaaggtggtgcgggactgtgggggtggtcgtactgacggtgacagtggttagcatgtggtgagtttcgctctgtttggggttggctagacacattgaaccacaaaagttcaagatgaaaacacaaaatatcaacaatgacagctgagtagtggggacggcagcggcttggtgtcgggggcgtgaaagagactttgcctctctctatctcttcctatgtttctctacttctatttgtttgggtataccaatacaaacacagctgcaacccataactgcgtctatgatgattttcttctctttcgtccttccccacattctccactcctccacacgtctcgttcccctctcctccactatccttttccctcttggccgactgccaaacgactctcagttcagtagtacactggagcaattgcttagagtatgggtgcaacatgtatctgtgctttcctatatgtatctgtgtagctgcatgcgagcgtgagagagtttgtctagctttgagggtgtgagtgggtgagaaggggagggggagggggagcgatcgaagtcatgtgcatgccttttgttggggtagttcgccggcaaataaatgaaatagaagagagccgaatgccatgtagtggaaacttgcttgagtagacgataccgttcgcaggaagaagaagaggtatgacgttgaattccttgaaaaaaactgagttgttggcattgttgataagcaaatactacgataaattaatgaaaatcaatttacatatgtaagtcttgcctacctgaaatgagcgatgtgatttagatggacaaaacgacaattaagaaacttagcttacttcaagctataatcaattcatcgcactgacgctttagtctgg
PCR verification status
Line verified as correct.