| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT12449 | chr2R 2033882–2036126 (2244 bp) | EcR, tRNA:K2:42Ae |
      weak |
procephalic ectoderm AISN, ventral ectoderm anlage, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 1 |
| 7-8 | ventral ectoderm anlage | 1 |
| 7-8 | procephalic ectoderm anlage | 1 |
| 9-10 | brain anlage subset | 1 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | brain subset | 1 |
| 13-14 | anterior ventral nerve cord subset | 1 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000546 | EcR | overlapping | BDGP FlyBase iFly |
| FBgn0011891 | tRNA:K2:42Ae | 3934bp downstream | BDGP FlyBase |
| FBgn0011958 | tRNA:R2:42Ad | 4141bp downstream | BDGP FlyBase |
| FBgn0011938 | tRNA:N5:42Ah | 6226bp upstream | BDGP FlyBase |
| FBgn0011937 | tRNA:N5:42Ag | 6809bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgctcgcactggatctagcactacgtcccattcgaaacatttgaaacacattcacgaattgaaaatggaatatctaactggatacactgagaatggaacttcttttttgaaagaaaactatcctaattacgctcgtacgaactatacctttaagtgatatacatacatacatatgttcaaaatgtaccatacggtgttgttcaaaactcacgtggatctgcatactaaattcagattaaccataaggaatcctagtacgaaatattatattaattgataacacgcatttacgcatcctttggggtgtgagatgattggctaattacaggactgcataccccaaagcatgcgtaaaccttctgaagtggcactaggacgaaagctctcttggcataacaaattatcctccaattcagagttagttctacactacgaagtgaatcacctggcacgagaaaatccttcgaaatcgactaatgcccaacgtccatttgtggcacgaagcccttgtttgttggtccaaataaaccagaggggattagacgcaaggcagtcaaagaagcaccgaacaaagtatccatcaaaacaagaacgttatgaacgtctccgtctgcatgggattcattatgtacatgcatacatatgtatgtatatagctgatcaacataataaaagcgaaaatttcacatgattttcaaggacaaacacaatgtgcacatatatgtatgtatgcacgtagtacatatgaatgtgtatatcggggaatttgttattttttggctcttctgttctcccgcttcgatttgattttttgcaggaattaattgtgcgggcttctgcatgaagcccacacacacaagcccacgttattattgcatttatatacccaaaaaaaaaaaaccaaaaccaaacgccgaaagcaaacaagaacccgccactctggaatcgacaacgtcgcacgaggctcctgtgctaatggcatttggcctatttatgcttccacgtatcgaaagcacacacacgcacacaacagcatggcagaaatattaggtaacgctggctccgggttttaaattcgtttttaacccttcgacggcgatggctgcagttggaaagttaattgggttaaaagcgcactgggttaacacagggtgtttggagagtcctgtcatcaaaggtacacagcagctcactggaaactagaaggacggacgctttacaagatacttaatgtattttctcccttatcacttatatatttatttttgttcagaactcctttttatgggtaattcatatccacaatatcgacaaaacattccataagctcaaaagagtcacctatagatatggatttattaaactaaataacataaattaaattttgtttttgcaaaataaactcattgacatgtaaagttctttaaacgaagtatttaaaaaaaaaacaattgtacaaaacttgtggaaattttggaggaccctgtaagatcagactcgactgttcgcttcctcggccctcccgctgttgcagtaacccattgcgggtcttcctccccaaacgtgaaatacgtacgcgtatgttgatatacatacatatgtatgtatgtatttatgtatatacattcaagatcaaggtcaaactatatatagaagcctatatatatacagcagaacacaaacaagaatgaagagaagagcggaagagagaatctcaaacatgtgccgaacccaaacacaacacaatggcagagccgagccttcggtcttggtccgatgccaaagtccgccagaccctccgaccctccgaccctccggccgttcctttgccgaccactgcggtttagctaccctgcagaccatttgacacactaagccggcagtcgtgtgttttttgcactcctttactctgcggacggacaatggcgagcaagtgtacctgctgactggcaaaaaaaagcatctgctgtctttccgctccaagcgcagagcagacgcgaagaccttgaacagccactggcagggcaagacgaaccagaaccgcagcgacaaatttgaagaggcgaaggatcgcattttggtcaagctacaaattctaaggtatagtcagaaaatgcaagcacgaagggagaggaaactggccaaaaccagttctgcggctctggtatccagacccttctaagatcccagacaccgagccagactggcaactgctatcatgtttcgggcgcatgattgaaaaatc
PCR verification status
Line verified as correct.