| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT12601 | chr2R 2498412–2500474 (2062 bp) | jing, CG15233 |
      active |
malpighian tubule primordium, posterior endoderm AISN, brain primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 1 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 11-12 | malpighian tubule primordium | 2 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 1 |
| 13-14 | malpighian tubule | 1 |
| 15-16 | brain broad | 1 |
| 15-16 | ventral nerve cord broad | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0086655 | jing | overlapping | BDGP FlyBase iFly |
| FBgn0033076 | CG15233 | 9930bp downstream | BDGP FlyBase |
| FBgn0053919 | CG33919 | 12925bp upstream | BDGP FlyBase |
| FBgn0262736 | Vha16-1 | 14335bp upstream | BDGP FlyBase |
| FBgn0026761 | Trap1 | 22740bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
accgacgaaggctgaagtcgttaagccaaagaatacgaatacgccagcaaaataaaagtaatcgtgcattgctccctctctgctgctgcgcatgtttctctgccgcctcgctgctgcagcgctgcctcggcctgcatttttagtttcgcccgactattacagcatgctttacattccgtttacatcacgtgttaaataactgctggctgtcactgttcgctgttcgcgaccgtgtgtgtgtaattgtgtgcaattgttgttgtttgcccaagcaaatatgcaatgatttttgcgccacccccaacccccatgccatctctccccctgcaaccagtgccttcttcattcatgccttgcgtgtatgtgtgtgtgtgttggatacacacccccacatccgacccacgcacacaaacacacgacaaaggcaacttctggcggatgaggaagccgctttcggtgtgtgcgtgtgtatctaatgggattttctaataaaatttaaattgttgccgcttttgccgtgcggcgttcgttctatgaatttaatatgacccctgtgtgtgtgaataggggccataaagctttgcttatggctggaaaattaaatagagtgcataatttaagcatcaactttgcgttgaatgcataataaacggctgcaattgaaaggcgccgtctaccaaaggactactgcataaatatcggataacttatactcgggctcagtgccaccagattcacaatttgcaacggacgaagggaatgtaagtccctggaaatggccgtcggcaaacagaaagtgtctgattatgtcgttcaaaatgttagctatattaactgccagtcaacgatacaatgtgtagtttaaagctgtcacgattttcgcagtgcgtctgtcaattaatgagcttttcaaatatataaatattagttccccgaaaaaatttcaacagtaagggatgcatacgggtgatttaaaattacttaaaagaaatcattctgcttaaatttatatgctttaaaccaacattacgtgatttcaaatttaaaaaataatagtgaataccactttacgatagcagagctctcaattaaaccctactgttttaaaacaagtgagtgtgtacacacatatactgatggtattgatgtttgtttataaaacgtactccatattaaacattacttgactacgtgtccctcaatttgttgttagaaattaaacgaaatttgagtccaacagatttctgtgtcatatttgagtatgaatccgcatctgtaaaaaaaaagcagcgctaaatgcacgaaaacaaaaatggtcggggtcgtccaccccattaaaaaattacacaaatgcaggagaaaaatggacgtaataggcttatcacaaaagcagtttggtcgtcgtaatctgtggtatctcccggggtaggcaaacataaaataaaatgtgttttcatttcatgagttttctttttgttgtgctttgtacatagatctaaaatttgagtaggtagaacttggatgtgattaaaaatgtttcacggaaggccgacggaaaatacaaaaccctgaaaatcgctgtccacaaagatttcgggtctagaatccaagctcgactaaacgatttattttaacgatcgagtaaagcgtctctatagctaaagattaaaaaaaatattttttacatatttgtttgcaattgcaacttctacatatgtacatatgtgaaagacaatatgtagaaagcacgcttgcttcgttttagttattcaattgatggataaatggcattgtatttattctgcacttatgtattgtatatttaaagtttttagcgttttaaattcattttttaataagcttgtaaacttttgcgtgttccaaaagtgaaaaagtatcatctatttgtatatcttttcgagcaccaaaatagcagaccgaattcaaaaataccctttttgtgtaaccagaggattttttgtatacttgccgacgtttatcccgtttcacatgtacatgtgtttaaccgaaaccgcacaaacacacacgcgacttggggctac
PCR verification status
Line verified as correct.