| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT13350 | chr2R 3936099–3938380 (2281 bp) | CG12769, Optix |
      active |
anterior endoderm AISN, anterior endoderm anlage, brain anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 11-12 | head epidermis dorsal primordium subset | 3 |
| 13-14 | head epidermis dorsal subset | 3 |
| 15-16 | head epidermis dorsal subset | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0033252 | CG12769 | 3486bp upstream | BDGP FlyBase |
| FBgn0025360 | Optix | 6066bp downstream | BDGP FlyBase iFly |
| FBgn0040778 | CG17977 | 17680bp upstream | BDGP FlyBase |
| FBgn0263970 | CR43724 | 18667bp downstream | BDGP FlyBase |
| FBgn0020279 | lig | 19361bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cgacgaagctggacagttaggaattgaagtcatactgggataatagagttgacatatttactagggtcaggatcttaagccgagtaaaacggaccacctccgtccgtatgaacttcgatatctcggcaactatgcaagttataaagattgagcagattccagaaatgcctagtttctaaaagtgtttttatgccaatttctatcgatgtttcaaagaaaaatgttgaaacttaatgctcgcaactgtagcgttctctccttttaccacgcgttttttcttatatggataatattctatccatatgagcttagttattcaagattatgacccgcttcccttcaaaagtatcgaatgtcaaagcctcattgagatattcaataattagtaaggtaaatctccctcgaatcgagcctcctttcggccaagttagctttaaatcggtttaggcccgcccgcacacactcgcccacacagatgcagggcatatattcggtcaattcggatgccaatggcaacaatttgtgaccacaaggagtcaggggaagtgtgagtaaattggtaagctctacactgagagaagaattgttggagtttaactggaactttaaaattattatagagcatcttctagactaagcacatgactatacacattttagagatgttttaacttaaactccactactttcgcctaaagctttatagaatatttttttgcattttcgacgaggtctcttcctgatgacgtcatttgcacggtcgaaaatcttgttctttgtctcgccgacctcaagccccatttaaaaatccatctgcattccgtttgtatgtgtctgtgggccttatgacacgtatgccaaatcggcttaagggcaagttatcggcatttgaaaataaaaacacgcgcattatcaacaccaagcagaacagaaggttgatatatatgtggcagtgcactgggagaaatggatctttgatttcatttgcccggattttaaaatcaattattatgaagcaaaattggcgcaagacaattgaatcgtagcattccaattcttattacataaatgcattaactgtatatacagtattgttttacaattaaaaatttattattatagcattattattattaaaacactttgtaactatcgattcttgactatattaaaagagcagataccattcattttgagcgtaacttgtttaattgaaaaaccatgctttaatgaaataaaaaatatatgtttattataacacaaacaaaatgtagtgggtatgaacttcaagtgaaacgtccccgttttctggcggtgtattctgtcggctgcattcagcattccggctgaaaacgaggatgaggatgtcaaagccaccgtctgtctagctgtcaatgcgttttccatttgtcgcctctaatgacacacatatttaggtgttaatcgcctcattggaacgctggcaggggatttgctcgcattgttgtccgtcggggatcggagagcggagatcgtggatcggggatcggaggaatccggagtcggtcgcagggtaaatattgatgctgcgattataaccattgatgcgttcacaatggacttgccgggcattatccttagccgatcaaccagccatccagctagccagatccctgctctccactccgctcgtcgggcgattagtcgtgaccggggtttcagtcaatgttttggctttaaggcgcattatcccctaaatcgcaaacaaaactgcaaacaaattgccgcaaagcgggacccccgaaacaagaaaaacacaccgatttgaggcgagcagagaggagcggagcatatgctcggaatccggatcggcattcgaatcgggagggtatcttaggtattaggaaatggccaaatggcttccgcggcagaggaagtgagctgccaatgatacgatatatccgaccagccgactgagtctcactttgatctgcaaaaaaggtgtttattctgatcggggttgtttaatgtgatcctgttccgtctgttcgagaaattagttcggaacttaaatgggtttcttctgtattaaaaaatacacaagaagggcaaacagaatttacggtttttatctctatatatgctttaacaaatctttcaatgtttacaaacatggagaaaaagtaacatccttttttttggaaattaaaaaaacaaatttaagttttacaccaactaaagacacatattaatatacaaaaaaaattaaagaaaacctcatgaatggctattgtttaagagcc
PCR verification status
Line verified as correct.