| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT13509 | chr2R 4227559–4229630 (2071 bp) | pdm3, CG11635 |
      active |
mesectoderm anlage, ventral midline, brain subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | mesectoderm anlage | 2 |
| 11-12 | ventral midline | 2 |
| 11-12 | brain primordium subset | 1 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 2 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0261588 | pdm3 | overlapping | BDGP FlyBase iFly |
| FBgn0033283 | CG11635 | 18484bp upstream | BDGP FlyBase |
| FBgn0050364 | hubl | 19412bp upstream | BDGP FlyBase |
| FBgn0050365 | spaw | 19412bp upstream | BDGP FlyBase |
| FBgn0250827 | whip | 22305bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcaaaaatttcacttccaaacggccattgccggaaaactgcgttttccattcgctagttttgcatgcagagcagaactaataagtacagtccttatcttagttgaactcggccattatccagccattggctccgcaaatgactttccccttaactcaagttaattaaaaaacccccgccccacgcccacacactcgcaatcagcttataatcagcttatattctggcgaatttataacccctcttgattatgagcggttagctgtcataaacaaatgacatgccataccatacaagcgccatctagcgagcggtgcgtgcagctacgtggccggcatatcaagtggaatgtttttgcaatgagcaaactgcaacttgcagtaattatgaccaagttatatggctgtttgaaggggggcttggtggaagtggtggctcctaatggcccggcccattgttcgctggtggggctgtaagtagcttttaataagcgaccgcgtcaagcaaataaataattataataaataaataataaattaccgtgcagtcggacggctaggtacagtcacacaatattgccgtctccttccgcttaattgctctcgccaaagggcacatgcaaagtgcaacactggatttgattcgcactaccccgactgcccgcgtcctactttatcggaggttaataaagcgcttaaagactcaatttgaatgcaacttagtcggtggactgcggccatttagatgattttccacattgtgcagctcattatagagctgcattttacgggtatgcaaatggtaatggtacagactgaattttgatgcatttgaaagtgttatcggtaatcgggcaatcgctaaacttttatatcacacttaaggcttatagtacttaagttgctcaattttaatttacctaatcttgtacatttaattgtgcaataaaaataatatgcgtattaaacatttttttagtaggcctgaatatttttaaaccagtatttattattggtattggtatttattattggttttattggtaatcgccaatatttttatgaggctcttaattttaagagtacagtcacgctccaattttttgtaatttgtgatatgtttaattaaaggctgggcttagatcagagaatctgtgaggatttcaagcttactgaaaggaaataggtcttgcaaataagcctggcctttttaagtgacttactcccgctgtggaaggactgctgtccggttaatcgattcaaaattcgattaccataacactctgcccgtcggccagaataaaaacactttacaaccccagataagtagaaccaccctcggaatggtcatgtcatgccgcacgaggtccttttgaccatgtgcagtgcaacaccccgcagccaaattctaattataatcgcgtatcgcatgtgccaaagccccaataaacctttgtcaagcgaatcgctcgccgagtcccctcccacgttctggcttcgtgtcattaacgccccactccgccgactgtggtctttgcattaatttttgcaccgccgcagagctgcagaaataaaaaatggaattgggaaagcaagaaatttccataatgagcacgtacacaatcacttaccccggacacatgcagttcgccaaaaagggtttccgctccgtttcgggggttgcaaaattttataattagttgtccgctgcccggcaccaaaatgcaggttacaatccaattttttccctctttttctacgttttaccaaatatttagacgttgattatggccgcttcacccccggagtcgagtctgcaaatgattttggtgcgtgctcaattggggagttttcagaccgaacgcgaacggaaaggatccgcaatgaactgagcagaagcaggagctggagctggatctgaccctcctcctggcacttcttttgtttttcgctaatttagcgaaattatgttttgtgctctctcatgtctagatgtcgtgtgcggctcggggtgcaattctgccgcccgttcccaggcctcctcgtaacccctagattatgcgactgcagcacg
PCR verification status
Line verified as correct.