| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT13653 | chr2R 4502548–4504339 (1791 bp) | Cirl, CG8642 |
      active |
amnioserosa, procephalic ectoderm AISN, ventral ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 7-8 | ventral ectoderm anlage | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | ventral midline | 3 |
| 11-12 | amnioserosa | 3 |
| 11-12 | ubiquitous | 2 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral midline | 3 |
| 13-14 | amnioserosa | 4 |
| 13-14 | ubiquitous | 2 |
| 13-14 | yolk | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | ventral midline | 3 |
| 15-16 | amnioserosa | 4 |
| 15-16 | yolk | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0033313 | Cirl | overlapping | BDGP FlyBase |
| FBgn0033312 | CG8642 | 889bp downstream | BDGP FlyBase |
| FBgn0033310 | rgr | 2749bp downstream | BDGP FlyBase |
| FBgn0022027 | Vps25 | 10408bp upstream | BDGP FlyBase iFly |
| FBgn0033315 | beta3GalTII | 11138bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
atgcccggagttggaacaaagaaagacacccaaactggggctccgcggggcagaaaaaactcgaagcgcagctgcagcaacttttctctacatttacatccacatgcatatatgttcgtgaatagtgtgcatcgggtgtacaaagaaaacgggtctttgttctgtccacgaatcgatggccatgcaacaactacaaccacagtgtgggtgtacacagaagggtgtgtattcttagctccctaccctaccccctcccctgccccatgccatcttcttatcttctatttgtcttttgcctgcttgttcgtgtttgcccaaggagtcaatatgtaaacaattatctaatggattctctacctttcagatacataagttgaatggtacttttgagtccaactttcatgaatatgactccaaacggaaatacataagaggtatgtacatatgtacataggtgtgcttggcctggatatcatcatacataaatataagaccattttaattattaaagatatataaatgcaatttataattcttacaattaattatgttttcttgatatttgcattgcttatatagtgttttaataggagttatacaaagaggttctgaatattaaaataacttaaatttattagaatctacacttttgatatttactgtaaccaggtcattagattgactcaacattgatgtgatattgcacaagtaaattaaatggaaccaatatcaataaaagaaaaggatagttctccttttcctttctaacgaaatacaacatgtcttaagttattagttatgtgccttaaaataataataataataataccaaacattataaatgttatcttccctttcagtttgaatacttcaaaccgagtgaaacactgccgaatgagcattgccgataagaaccaatgatggacgatcgatgattcgtgatctgggccggcaggatttggtatttatgactactattgcacttgctaccaagctaacgacccacatactccaccatcaacctcagcattactaagtatatcccaggcagtgtaaaagcgtatcatgctaccaaccatattgtcaatatcctatgagcatatatcgttagatcgtaagtgtctttgcaggcccaccaacaatccaatccaaaccaaaccaaactacaacaatcatcgccgctaaccaaaaaatttctttttatatgccatatatatataccatgtccatataaacccataccctgcccagcaccctgtgacttatgaagccttcgcctttcagtgtccaagtaccaaaccgcctacgcctgcgaaggtaagaaactgaccatcgagtgcgatcccggcgatgtgatcaacctcattcgggccaactatggccgcttctcgattaccatctgcaatgaccacgggaatgtggagtggagtgttaactgcatgtttcccaagtcactcagcgtactgaactcaaggtaatacatcttttaaagtttattggatcttcaaatcattaaacatgtcatttggaaatttcatactctggttgcgaatatcaataaactatttcaacacaagtcaatcaatcaagcatcttaaatatgtgaaaattacccaactctgtttactgatgaacgcgtatttttcccattttccagatgtgcccacaagcagagctgcggcgtgttggcagccacgagcatgttcggggatccctgtcccggtacccacaagtatctggaggcacactaccagtgcataagtgcagcccaaacttcgacgacgaccaacag
PCR verification status
Line verified as correct.