| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT14978 | chr2R 7081823–7083895 (2072 bp) | shn, CG13229 |
      active |
amnioserosa, anterior midgut anlage, posterior midgut anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 7-8 | trunk mesoderm anlage broad | 2 |
| 9-10 | ubiquitous | 2 |
| 9-10 | anterior midgut anlage | 4 |
| 9-10 | posterior midgut anlage | 4 |
| 9-10 | trunk mesoderm anlage | 1 |
| 11-12 | amnioserosa | 4 |
| 11-12 | ubiquitous | 2 |
| 11-12 | hindgut proper primordium | 3 |
| 11-12 | anterior midgut primordium | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 11-12 | foregut primordium | 3 |
| 13-14 | amnioserosa | 4 |
| 13-14 | midgut broad | 4 |
| 13-14 | hindgut | 3 |
| 13-14 | ubiquitous | 3 |
| 13-14 | foregut | 3 |
| 15-16 | amnioserosa | 5 |
| 15-16 | midgut broad | 3 |
| 15-16 | ubiquitous | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003396 | shn | overlapping | BDGP FlyBase iFly |
| FBgn0033579 | CG13229 | 22113bp downstream | BDGP FlyBase |
| FBgn0033582 | CG9084 | 23098bp upstream | BDGP FlyBase |
| FBgn0037084 | Syx6 | 25221bp upstream | BDGP FlyBase |
| FBgn0033584 | CG7737 | 28553bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
aatgtcgatgacgaagacaaccaccgcccctcactactcaccccttctggaactcccctggcacagccccttccatcgcttggagaggcaacctcctcctcctggttggcgactcccaaaagcggttcaagtgaatggtcaaacctgtttgctctgcggacagcgtagcggcaacatcgaatcgtgggcagttgggggcatgtgcacgagcggtaataataacaaagttggagccgccgagcggcgacggcgacgacgacgacgacgtcgccaacatttgctgaacggctgaacgaactgctgaacgggccagacatgatcacgtcgccgtgttgttgttgctgcccagctctctgattgtttgcgttgtctgtctgcgccggagtttggagccacactggtgcactgagagaaaatccagcaataatgggaatatatcttgattttaacatgataacttaaatcacagaaattctaagtggcatcattggatacttacaaaaatgtacatatgtatctatatttgcatctttatacttatgtatctaggttacaaatatacatatgtatctacatttgcacctttatacttatgtatcttgtatgtttttcaagccttaagatattgtaaattcaattgataaattcacaagagtgaaaatttttgtgcctgtgtagcactgtcgccagtttggcggcactggcgatcgtagcttctggttgcaatgttttcagcgtcgccccagcccctctccatgcccctccgcacccccttgacccgcgcttggccccgacttcccccgacatggactgctttatgtagcgcttaatggtttcatttggcggctgagcagcgtttctccatgtgtgtctgcgagtgtatcgattacccaatgcgtgaatgagtaagaacccatcgggggcgacgtacgctggctgttgttgttgcctttgctgcacttttggggccggccacttgtgcctatttatgtttgccagactcgcagatacttgccactgccacagatacaccgcagcgcgcacagatacacagatgcccggttaattgttgccgtgcagcccaattgccgatcatttgggatggcttcgagtgactgagagtgtgtgtttgtgtgtgtgtgggtttatatttttaaatcaatcgatgcgatagacgttttattgctgtaatcaatcgtcgcgtgcatgtggcagcgtcgcctgttcgattaatcgtacgagttcgaccacgagtaccaacaattggtattacacagatacggataccgaatgcatgcacctagagatacttcagatacttgtttagctatgtggttatactgggtgtcatgcaatactattttagatctggatcttttctacactatttacatacatacatatatggaccaaactgtgaaaacgatgatcctggacagatcattttatttatgattactatcaaaatcttcataatcttatcaaaaatttattgcacgataataatttcaaaatataaatctgatgtcactggatggactcaagtttgatatgacaatgtgtcggaatcactgtccaatttcttttcgtgtacatttctacgcgtatgtagactcgtctacgtgtatatgtatgtatatacgtattgctttaatagatgagtgcgtaccactcgttctcgcttgattgtgtttattgattagattgtttacctttcttcgtgatatcatcggcgaccaagtgctgagcgttgttatcgtacgtcaactgtccaaataaatgtacatctgagcacacatcgaaaactattcctatggcatggaatatattgacacatacatacctatgtatgtatgtatgtatgatggattttccatattgagagcgcttgtgtggtgatagttcttatcgaatcgcttccgttcgatttggcacagaaagtttcagacttcgggggactttcagtgtttctgataccattgttgttgtcaagctctttgggcaattcgctgtccttatcgtagatggatttttaatggctgtgggaaaaggggaacgtgatttatgaaacgc
PCR verification status
Line verified as correct.