| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT14981 | chr2R 7086913–7089020 (2107 bp) | shn, CG9084 |
      active |
trunk mesoderm AISN subset, A-P stripes, pair rule | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 3 |
| 4-6 | trunk mesoderm AISN subset | 4 |
| 4-6 | pair rule | 3 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | A-P stripes | 3 |
| 7-8 | trunk mesoderm anlage broad | 3 |
| 9-10 | trunk mesoderm anlage | 3 |
| 11-12 | ventral midline | 2 |
| 13-14 | somatic muscle | 1 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003396 | shn | overlapping | BDGP FlyBase iFly |
| FBgn0033582 | CG9084 | 18008bp upstream | BDGP FlyBase |
| FBgn0037084 | Syx6 | 20131bp upstream | BDGP FlyBase |
| FBgn0033584 | CG7737 | 23463bp upstream | BDGP FlyBase |
| FBgn0050021 | metro | 27050bp upstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
gttacgacccgaacttaaacatttgctctttgaaatctttagaaactaaagattctgcgggatgtatctaaaactaggatataaagtagcgtgaaaaaattaggagtcgaattaagcatttatcgatctttttaaactatatattaaaaatacaatcacttaaaaaatcagattgtcagtacttcagcttgatgtttcccatggcggagtttcactgtacacgtacatatctcagggtcttaagactgctgctctcaagtgttttgcgaacaattaaacatgcaacagttataatacgttccgcctttgctgcctgtgtgccgcttgtgagttttgaggaatgccctgccgcctggggaatgacgacacatgtttatcgacggggcaacccctaaagagcagtcatgaccttgacaacagagctacagagcaacagatactccgcactcacagccacagccacagacacagataccgatacagatacagatactttcggtgcgcgtctggaaatctgttaccattttttttcacggccaatgcgcatgcctgtgcatacatttcatcggctcgattcgaatcgaatcgaatcgaattgaatcgaagcgaatcattcgcatagccccatgagtttgcctacgtaagcgctttgaatttatcaaaatttttgtgtatttatggctatttcttttttctcactttttgctaatatgcaaaaattcacaacgccgccaacgtatttccgtccttcaaatgccaaaacgccaagacaagcagaaagaagaagaaagaaaaaaacgaaaagaaaagaaaaaaaatttcaagaaagaacaacgcacacaatttgtgaaaatttttattttgatggcttggcgctgggaaacatttttggtttgctctcaaatgcacgatttggagattcttttctttaatcgtttgctttggtggcctttgatagagcagaagtatttataaacagtttaatttaattagaccacgaaataagaaatatacgaaataacgtgacattagataaaaaaaaagcaccagcctttgcttttgcggcgccataaagtttgaaatatcgagaatgtttcaagattcgttttatgggggggcgaaattgaattatgatcgttatgggctgcgccaaattgcgtaatcgaagtgtttcgagttttccattttgctgtcataaaggcaaatacaaatagataatatttaacaaaaatgtgctaacgcaaaaggccaatagaggcaactaaaaatatttatgcagatatatagacgccaatgtgtgtatatatagccgactagttggctctataccgtctactgtctaaaataaaacacttgaatgtcgtcttacgtagttggagcatttaaaaatacttttctagcgaggcggcggcaccaaaacaaaattgaaaatcaagaaaatcaagaaaatggagaaaatcacattctatcagccagcagagcaaagtcaaaagtcaaagacagtgggaaaataaaaataaacacaaattatcgaacgatttctgtctgcttttcttgatcttctgctgtgtttcgcttcgctttgtgtgtaaacaaaaaattgttggcctggcaattatttaacacttttggccacgaattcctatatttaaaggggttctcttaccaatttcgcaatacggagaaggaaataattcgatatttactttgaactcatatcatatttacgattatcgtgcccccaagcaataatcataataatattcgaaaatatatgattatgaatctggaaaatttattcgtttttgctaagtttttaagcttttcctttaggcacctttattaaattagatatattttaatagtccataaatctatagaggaatgtctaaaaagtgctaaattatattgtttaaactgttttgttttgctgtgccaaaaatcaattttgtttatacagattttcacctacatacatgtaaacccagagaccttggcaatcggaaaacatttcagtacgaaaagaacatgatttttactctcgagaaattttacaaattttctctgctgacgtcaaagaaaatttgggaatttccgtgctaatgtga
PCR verification status
Line verified as correct.