| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT15341 | chr2R 7779541–7781099 (1558 bp) | Ef1alpha48D, ERp60 |
      active |
mesoderm AISN, head mesoderm anlage, trunk mesoderm anlage broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | mesoderm AISN | 2 |
| 7-8 | head mesoderm anlage | 2 |
| 7-8 | trunk mesoderm anlage broad | 2 |
| 9-10 | head mesoderm anlage | 2 |
| 9-10 | trunk mesoderm anlage | 1 |
| 11-12 | not active | 0 |
| 13-14 | brain subset | 1 |
| 15-16 | brain subset | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000556 | Ef1alpha48D | overlapping | BDGP FlyBase |
| FBgn0033663 | ERp60 | 1042bp downstream | BDGP FlyBase |
| FBgn0015543 | snoRNA:Me28S-A1322 | 1087bp upstream | BDGP FlyBase |
| FBgn0260959 | MCPH1 | 3961bp upstream | BDGP FlyBase iFly |
| FBgn0260932 | cuff | 4434bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
cggtttctgctcttttgacagttgcgtagcttcggtcacaccatgtgtcaaacgaggcttcctgtgctgagctctgccgaacgctcgttcactttgttcgaatccgtcgccgcttagacttcgtgatttctcattcagcttattcgagagtaagttttacctgcgaggctataattaagtaatttctgcaacgggactgcagccagaaaacaatttataaacaaatatgcagctgagacgccgaatttgtgcatatttccagtgtttttcctgtgtgtgtgtaataaacccggagataacctctaactgcggttttccaaagtgaaaggtggccatagaagcaaacacgtggcaagtctgcaaaggcaaaaattttaactggcgttcccagttaaagttcccagcattctcaaaataattttccggcttttccggccgcattttcgccctgcaatatggtgcacttagtgtgtaattactttgccacgcccacgccggacacagaggtcatccaccagatgtgctcattaaccgagaaaaaaaaacgtgctttctctcttgcctttgtcatgacctatagatattccttattctttctttttgcggcatggaattctaaaatggcgacccagtggcgtgagtcaagtgggcgaaaaaaattcgcctggcaacaagcgaaaaaatgtgcttttttgggtttccagcccattagcatatctggtgaaatggcactcgcatcagctatttcgccatttccaaccgactccataattggttttggtaaaatggctgccgctgcactacgttcttgaataattcgttgtgtgcccctctctttttcatttctttccaattaccaattgtgccaccgcggcgagatcgcttgcatttgtacaagtcacacacgcacactaatgcacatccgccattttggtctctctctctctctattcctctcttacttttcctccggccggcaacagcgtcacacaaatacacaggcatagatatacacacgcataggcagataagcacatgtgtatttgcgaattaaatttgctggaattttcctttggactcttcgatttaacatgatgatgatttttcagttctgctactgaagacagttgacgaaagcaaaaataccaaaatcactgaaacaaaatcgagtttccatatggaattttatttgcacgctcttttctgtagttgcgccccactcgttttacccacacccttacatgcgggcactggacctaacctcaaaaaacacgttttgtacggctgcaagagtttgaggttaggttgtgctcgcgcatgcaaacaaaagtcgaacgtacgctagggaaatgagaaagtgttatacccactaataattgtagttgtaatcccaccgaatgctaacgaattgttttaccctttgtttattccaacctctcttgctcgccaacccgccgaaccctgcaaccttccaatgttccaacgttccgtcaatccaacactcgaatacacacaacagccatagtgtaatcatccaacatgggcaaggaaaagattca
PCR verification status
Line verified as correct.