| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT15409 | chr2R 7907290–7909826 (2536 bp) | otk, CG8964 |
      active |
ventral nerve cord anlage broad, ventral nerve cord primordium broad, ventral nerve cord broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | ventral nerve cord anlage broad | 4 |
| 9-10 | hindgut anlage | 3 |
| 11-12 | head subset | 3 |
| 11-12 | ventral nerve cord primordium broad | 4 |
| 11-12 | hindgut proper primordium | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 11-12 | trunk mesoderm primordium | 3 |
| 13-14 | brain broad | 2 |
| 13-14 | hindgut | 3 |
| 13-14 | ventral nerve cord broad | 4 |
| 13-14 | proventriculus | 3 |
| 13-14 | midgut subset | 4 |
| 13-14 | esophagus | 3 |
| 13-14 | visceral muscle broad | 4 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | midgut chamber | 4 |
| 15-16 | hindgut | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004839 | otk | overlapping | BDGP FlyBase iFly |
| FBgn0033674 | CG8964 | 3361bp upstream | BDGP FlyBase |
| FBgn0265365 | CR44306 | 3891bp downstream | BDGP FlyBase |
| FBgn0259985 | Mppe | 5829bp upstream | BDGP FlyBase |
| FBgn0260012 | pds5 | 8200bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cgaatccaatcgaacctcaaactcaatctgaactgcacgcgttcgaagtctgtttattactgaactccgccggctgttcgaagttgttggtgggaaccggcttttgctgctctctcagcggaaaatactgggttcagttagcgctctctccggtggaatatacctactcgtgaccagtatttcttgcatgccctgtatttctgccagtgctgccgagctgcagcagtcgtttgtggcgcggcaagtttgaagtggaattttaaagacttaactcacaagtttcatttaatttaaaatacaccaaaacctaaaattaatttatataatatatataaatatataatatttataaagagcaaccaacttaagatgatcatcgtgagatgtggtaaaaatggtttattgtgattaaaaaactaagaattgttttatgagtttatatcaaacatgagtatttaatttgcgattattccccctagctgaacccgacactcttcctaatttcatttgatgaaataaagctatcagttgtctgcaatcagatcagagagtcactatgcaaaccgcccgctgtctcatcatccaaccgtttccccctgtttttttttttttgagtccaaacaataatgcgtcttaatgaccaaagcaagaatcagctaaaatggggtggccggtcggcagtgggaggaaatccattggtggcttgctgcttttacgagcagatatacgacgaaactgcaagatacttccactaccaattttccacactcgaagaaataaagaaaattttaaaatgttctatgagagaaaatgttatctaagagcaacgaaggaaaattttgataatacagcaaaaccaatttaaaaacaatgacatataaatttaaatccaattgaatcttttgattgaaaggttcggctcttaatcatataatgtttataaaactgtagaagttttctatgaaattgttggataggtaaaatggttgattggtataaaattatagtttctaaactttttaaacaaattctaatagatcaaacctattgctgtgcatctaagacagtccttggctgctactgtgcgattatgagaacgggcctgcgtgagtgtgtgtgtggatttccattttatagttttccgcttgatttttttacgaggcctttcaaccccgcacaatggaaaaccaagcgaagagccacaaaaacaattgcagctgatcctttagccggcgttgactgacacccaagagtcgtaaactgccgttgccatttgtataaactatataaccgagaggggtggtgcccaccccatttcctccttcccccaaaagtcccaaaccccgcccctgattaacagtccgggccctttgtgattatatctgcgtggaaatgcgtgtgtgcggttatcaaaggctggccatggcgatgcccagaagggcgaagggaccgaccatccaaagttgggcctccagtgcgcttttccacctcccatttcccagtgctcgcgctgactcttcggacgaacgacagttattgatgtcataaagttggagatttatgccatcgcctggctggaatgtagggcttatgttttattataggccttgttttgaatttggttccttttcgccttcgcctcccttgattttggggtgcaaagcgatcgggcgaaccgaagctgcaaatggtgtgttaataatattgtattaacttttcatattgcaaaggggttgccaaggggtaatatgttaattggataagtcgcacgatgccacaacttcatttatttcaaaaatatgagaccctctttgctaaatcagtagataaatacatacatacaaaaagtttcaatttgaaaaattttattttcgaaatcgcactctttgtcggaagtcttaagtatatccttagaagatcgttacaaatttgattgctctgttcttggaaagttttaaacgttgcaacttattcctggccaaactagaaagaaatcttttcatcttttagggtctttcgactataccgccatccatatatgtttaagttattatttcgaactgcttaccgtaactcaacgcctcgcaatcgtataattttatggagcatcccaaaagttgcaacggattccggctagaatccaaatcggaatgccgcccatagcaaacatcaaacattagaaggcattaaaataaattttagtaacgcggcctttgcgtagactaaacaaaataaacatacgtacatatattgtagtacacagcgtttgaaggtgtttttgggctgaggcccgccccgtgcgcacttactataaacaaataaggcgaaaaagtaccaaaaaaaaagaaatagaaaaaaaagggggaaatcgaagaagaggaaaaacatcagcggaagggcccccaacaacaagtttttaatgcatgtcgatgtcgtcgtcgccgccgcagatcaaaggcaaatcgcctatacatacatatgtacatatgtaggtgcatggtacatacatatagagaggttggggtgctgcataggat
PCR verification status
Line verified as correct.