| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT15828 | chr2R 8665547–8668087 (2540 bp) | sca, CG12374 |
      active |
procephalic ectoderm AISN, trunk mesoderm AISN broad, ventral ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 3 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | trunk mesoderm AISN broad | 4 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | trunk mesoderm anlage broad | 3 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | brain anlage broad | 4 |
| 11-12 | brain primordium broad | 4 |
| 13-14 | brain subset | 3 |
| 15-16 | brain subset | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003326 | sca | 2499bp upstream | BDGP FlyBase iFly |
| FBgn0033774 | CG12374 | 14218bp downstream | BDGP FlyBase |
| FBgn0086904 | Nacalpha | 17044bp downstream | BDGP FlyBase |
| FBgn0020930 | Dgkepsilon | 18319bp downstream | BDGP FlyBase |
| FBgn0011227 | ox | 20514bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgcagccaggtgttacaacccagttggttattacataaagtgatttgtttttagtataagtgcaattggaaagaacaatgctggtggcccatcaaatcgtatagagtacctgcttttagcacctgcacgagacctcaaaagagccttcaatgggaagcacccgttgaaatccccatcgaatatgagtggaatgaaatttgaactccattcgagtcgtgccacgctcacatttaataccaattcagggagtgaactggagaggaccgacagactttccaggccattaccttaatatgctgaccataacgtgagccattcgctgccatttccagccacatttccctgcataaaagccaacaatataacgggcgacaatgaaacaaatgctcagtggggtggtggcatggacacgagggcaaatggtcggctagtgggggttgggagagtgccatgcaaatggcggtagccaccactcccaggtgcaatgccccatcccacaatgcacttgtcgtgtgcaacaagctagaacagaatgacaacaaacaaaggcatcaaattaaaaactaaactgcgtccactcaaaatatgcaaacagtacggccggatggcaagggcaagttgtatgtcccatgcatgtggcatggatgtgcatgtggccaccgcttgattatgcagccacatccattgatgatggccaccacaaaggggctggccagcagctccggcttgttctctgccttctctgaccaacgttcgctgccagcactacattaaaaagtaaaaccgaaaacgacatcgaaataataggtagtgcgcaattgggagacccgaagatgggaatacacttggataccttcaatatgcccttaccttaattgttaggcgataattggagaacatactttaattgttaataataataactaatgtacgcagcttctacagcttctaactaagaacgagttaagatttttcgatgaataaataataaatgaaattattgctggtttgagctattactttctgttgtaaaatgccatttatttcagcagttttctagtaatatatactaaaattatagattataagacacatatattgttctagttgaccaaatgcacgtttgccattgcaaaactccttgcaagggtatgaaaatatggcaaattgcaacacagcttcggcaagtgccaacaatggcagactgttgcacccccttgcagtcgttactcttgccccccccccgcttttccaccaatttccctccctttgctcagccaagcgcacattccattcagctgaccccggaacctgcctcaccccttgtatatttatggatggaacaaaaatagtaaaatgcatagcttacagcgctttttttcggtgcgtaaggcggcatttttggcatattttttgcacacattttccccactttcgatgggccccctaccatttttttttggagccatgttgcaacattgcagttagtgggcttacgaccacccattcgattgcacgcctgctccttttttgcctgtgacttttgcagccgcattccaactttgcactttaaaaccttttccggcttttatcagcgaatcgcgtgggtgggtggtcgtgggagatttatatagaaatagatttatatagagatctcccaccaactgtgcactaaaaacaaatgtcccgaaaagcggcagatctaaagggatttcggtctggaatgcaggcaatagttgagccattagtatctgatttcctatcaaggtatttgcttcgaacatccttattgtttggaatcaggaaatcttgttcccccaggtaactacgaggaattccaaagacaatagagagtttcgctgctgcagtttcttttgtgcgcctatgggctgtccttcctccttgcaactacccgtactcgggacatttggctccgtctggtttttgttcgtcttgcagtatatctagcacatcagcatgttttcgcacttcgccttctgtctgcctgcctgcctatggggccgaaacatctgccgttttcgttgcagtttgttttcgttgtagtctcaccgcaaccgcgccatgtgtcaggagcaggatgagtgcaaaaaagaagcaccgggtaactagaccgccattttgtgttgctctcgttcgctatctgaaactccgaatggtaactgctgccttaaagacatgatctttggtaatagcaaacatttcaaaggacatttttcgggcatctaacatcgagtttattcattgattttctcttaacttgatgcgttctctttgtcgctctctttcctgcttgttgcatgcttcgggcaggtggctgctctcttcggcactcttccccggcaattcccccgcttaatttaccattgcctttaccgcaacttcgtactcgtctgctctctcgctttagccgaagcgtgccgaacgaagccgagcattcggcatggcagcgaataaaaggaagtgccgaagacgcgccgcttcagtccttcgaagaacgccgcgctgaaaacatccttccat
PCR verification status
Line verified as correct.