| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT16424 | chr2R 9849619–9851852 (2233 bp) | Cp1, Rpn13 |
      active |
head mesoderm anlage, head subset, brain primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | head mesoderm anlage | 4 |
| 11-12 | head subset | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | yolk | 3 |
| 15-16 | esophagus | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0013770 | Cp1 | overlapping | BDGP FlyBase |
| FBgn0033886 | Rpn13 | 1711bp downstream | BDGP FlyBase |
| FBgn0261975 | CG42806 | 2539bp upstream | BDGP FlyBase |
| FBgn0262739 | AGO1 | 4026bp downstream | BDGP FlyBase iFly |
| FBgn0020766 | Aats-phe | 6194bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcgaagttagtgagccagccctgatattttgcaatctggtttagtggcttcacgtgaccgacactccgattgttagtttgcttactaattgtgtgatttcttgcagattccagaacaaatcacaatgcgcacagctgttttgctgccacttttggccctgctggcggtggctcaggccgtttccttcgccgacgtggtcatggaggaatggcatacgttcaaggtgagtttcaaccggatcatctagggatcatatttaattcgccaggccgaagaggcagataacaagtgttctccggtaacaagggcttgatgtgtaatgatgattaatccattaattttttttttgggcctttgtcttctgtccgactttgtttgcatagttggacgcgcggcattcttccgtttgtgacgattccgcacttctgacttctgagtcagcagccattgcgagtgtgaatgcactgctgcgcggctgcctcaaagagacggaaggaggattcagataagtccaaaagtctaggctgtcgtccagtcacatgccggctcacatgaccgcaagcggcaagctgggctgctttgcttagcccatccgtaaacatcggctggatgggcagataatccaagtcgttgtgtcgcccactttcgctacgctcgcggttcatttcccgccgataagccgtgcaagactcaaactggtccactgccggccgactgataaggcgcgggtcgcatatttgccatcacacttttcgcaagccatgtttcctaatgcgacttcgatttttgcccccttctattgcatatatatgtgtgtccatggttccattgatgattgggccaatcatcctttgtctcgcagccttcacttgcaacttcgtctgcttatcaatggtggattgtctattgattaattgaatgcgcccctagtgtcgtctaattcttatcgccaacagtcaggggtcgtgattttttccattattttactgaatagttccgtgccaagcgtcattagccccaaatgggggcgtacaaataataattagctgtttgtgcagagatctcatgtgataagggggatatatgtacatctctatatatgcatattggtttaataactttggatattttgcctttgatggttttatattcacttttcgaattcaaattcaaatgcacccgcatatgcaatatatgcatataactttatttcccttcctttttttatctgctgttaaatatcatattcaattgagtgactcatttgttagagtaagcacagagtggtgtattaaattattgtttataaataacaaagtctgatcaactgaaagaataggaatcatatttatggaaagagttactcatccttaattaaaaataaaaagaaaatcaactaaacatttgcaatttccccactcatatattatttacctaactaaattttctttgatcatctaatttagtttagatttagttttcttttttttttcaaaataaactcacaattactttacatttgccattttacatttcgagaccgttaggtgtcatgtagaatactgcaaacgctcggtcacactgctgcaaacagtgctacccatgcttgcttggggaatgaaaggcgcgcaatttaaatgtgataacgatgccaaccattagctctcactgcttatagttagttaataaaaacgacattatctgtaatgtgtgtgcagtccaaagtgccacagttgtcggttgcaaatgcacagctgcaaaagtcagcgttgagcaactgtggcactgataagctctaaaattccagattaatgcgttttaatttaagcagctattcgcatagttcggcaaatattcaacaacaatatttaagaacaagtcgtgcggggggccgcgagcattttggaaatgacgcgctacaaatcggcgttgcttatcaaattgccatttttcgctggcatttccgagagccgaaagagatttctagcattaattccccgagtgacaagtgcacaaacaaatcggctgccgtaaataaacaagctgggaaaaatttcgctgacttgcaaaagcagcatgcggctcttttcttacattttttattaaagatacataagtttctgttttttttttcgtttttttttaaatctgttacttctgctaaccggttggagcaaacatatttgaatagctcgcctgaaatccttataaatcaaaatgaaaccggttcgcct
PCR verification status
Line verified as correct.