| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT16426 | chr2R 9852501–9854608 (2107 bp) | Cp1, CG42806 |
      active |
posterior midgut primordium, midgut subset, posterior endoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | anterior midgut anlage | 3 |
| 9-10 | posterior midgut anlage | 3 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 11-12 | anterior midgut primordium | 2 |
| 11-12 | posterior midgut primordium | 4 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | midgut broad | 2 |
| 13-14 | brain subset | 2 |
| 13-14 | midgut subset | 4 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | brain subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0013770 | Cp1 | overlapping | BDGP FlyBase |
| FBgn0261975 | CG42806 | overlapping | BDGP FlyBase |
| FBgn0020766 | Aats-phe | 3312bp upstream | BDGP FlyBase |
| FBgn0033886 | Rpn13 | 4593bp downstream | BDGP FlyBase |
| FBgn0033887 | St4 | 4914bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggtcataaatggcttcgttttcgcctacattatgcgcaagcggcgggaatacaaatgccaggaggaggagctgcagcaacaacaacaacctgttccacattcctcctatgcggccacttcgacaacggaacggcatgcggatgcggatcaggaggacgatagctgtgccatcgagatggagcgactgtagggatggagatcgcactagctaagctctctgatactcaactactatcgtccaagcttctcaactgcaacgaagtttcctaagccacatatgtagtatatctagattgatagatacaaaacgtatacgtcgagtgcctggatatcacatcggatcgcacgtgcatttaattacggtgtttttaagttgttaactctatctgcatatatcgcaaattcaaattttctacaaaagtatacaataaatgtgtgaattttatcatgcggcaacgagaaccaacgacgtttgcaaggaaaatcaataggtcagtgtgccgggaggcgcctcttttctgccgttaccacctcctccctcgaaatcacaacgggcggggtttcattttgctgcaagactcgaattcgattcaattatgtcaattataggagtcaaccacggaccagtggaccccatccggtccatttggggcgacaattgctgatgctggtccgctttgatgtccaaaagtaattacacatgcatgtttctcacatgacagcgccactcgactgttcagttcaatgtgccaagtaccctggaatattgcaaaatctactaagacttgtggtgagccacttaaaaagcgattaggtttgggtttatacccatatttcactgagaaaacatgccactttgagtgcgttgaagagtcgcaaaaaaataaccagtttagcaataaacacttttggaaaatgcatttcagtttagcatgtttgctatttggatattcgtgagcagtaataatgagttttgttgaataattctatatacttaacttaactttcataaacttttcgattctatgcaaagccgctaatttggtattcagacaagaggaagtcaatttttattcacaaatttcactttgaatcgaaaactacccccatatagtggcatttgccgaatctaatggatagcaacctagtcgacttcttgccctggcctttcaattccctttatagctatcatttgtttagcgttcgtgctattttcgtgctgtggctgtgtcaatatgcgggtcggactaacaaacaaccccgagctgggagaggaggtctcttatccacgggaccactgcaggcagatggagcgcatttcctcgtgctggcctcgcttctcctattcctacctgcagtttggctcgtttgtttactacctggaacattaacacccgtttcaagttcctgtcgttgggcaatcgttaaacacaattttatgaccatgttttatagatttatagagcttgctactgtggccgttcctctagagcgtttcgctcgtgccaggttgacggcgctgtgataaggtgtaatctgcagattaagaacttttgcctcagcgatcgtaaatccattttacgtaaaacattttatttgatttttaatagagttcccaaaaatgcgtctaaaaagttaacttttcatttggttggctttatcttatcttgaaacaagtacacgaaagtcaatcgatagtagcacttacctttgataagagtgcattatctaactaatactaatacttttcattatgcagctggagcaccgcaagaactatcaggatgaaaccgaggagcgtttccgcctcaagatcttcaatgagaacaagcacaagattgccaagcacaaccagcgattcgccgagggcaaggtgagcttcaaactggcggtcaataagtacgccgatttgctgcaccacgaattccgtcagctgatgaacggcttcaactacactctgcacaagcaactgcggtaagttgggatcgttaaggattataatgtgcacatattcaactttgcattcgctttcagtgccgccgatgaaagcttcaagggagtcaccttcatctcgccggctcatgtgacgctgcccaaatctgtggact
PCR verification status
Line verified as correct.