Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT17000 chr2R 10986473–10988602 (2129 bp) CR44457, chn activityactivityactivityactivityactivityactivity
active
mesectoderm anlage, ventral midline, hindgut VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8mesectoderm anlage3
9-10mesectoderm anlage4
9-10hindgut anlage2
11-12ventral midline4
11-12hindgut proper primordium2
13-14head subset2
13-14ventral midline2
13-14hindgut3
15-16hindgut3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265650CR444576524bp downstream BDGP FlyBase
FBgn0015371chn16268bp upstream BDGP FlyBase iFly
FBgn0053467CG3346742728bp downstream BDGP FlyBase
FBgn0262954Rpb1246000bp upstream BDGP FlyBase
FBgn0033993CG808946857bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

atgggcgggtcaatcaagtcgttcggtagaattaacaataattgtaacccttcgagtaagtaaattccgaattaacagatctattaaacatagtagtacataaaaagcagttagaaatgattaatttgaatttcaatttagtgaaatattaaagatatatcatgttgtgtatcgatctatgtaagtacagaaaatttaaaaaaataaaaaaaaaataaaatctttaacataagttgctgttatctgtatgatatagtatctatggtatggtatctgttgaatatagtatctgttagatatagtatctgttggatatagtatctgtcgaatcatagttacaaaatctgtgtacgatcgcctattttaagcagtacgcaactattattttaatcacgactgtgaccaataaattcccttgaaccgaatgaacaattgcgactgccccattgttttcgtggtcaccaaatccatggggcagcttaattcgggtttccagatctttcacaacacatcgcctcatgacaaatcccagccaaagtgctccactcacagatgctcgacaatgtccaggcattttcccaggtgtattagtctaaagccaatacgtacgactgccgtacaataatcaaggtaattaacatgcaaacgaaattatgaacgagagcaaaaggtaaacacacgcagccggtggcggaggcacaattctcaatggaaattcattgtggaatttcgggtttgtacaaacacggctctcacagaaacgtggcccgaaaatgcccgtaaagataccccaagatccctgggaaaagccagaaactccggaacgtgatgcgacagttgtgatgcggtctattggtattgccattgtcattgtcattgcacagcctcttttaaagcggggcaatgattggcaaacgtacacaggtacgtaatatggtaaaggtaaactggtaaaggtaacatggtaaaggtgaaatggtagaggcaatgccaaagtcaaagtcccgactcgacctctatgcgtgcgttgtgttaattaagcaaagtgagcgagagccacgtagacgggtagctgggtatcttggcatctgaaagatgcattcaaataaaatgcacagacacagacgcagacactcgctcgctcacacccacatacatacatccatgggcaggaggagatgcaggaggagtccgcggacaaaaggacgcagccgtcgacggcgatgacaacggcgatgtcaaagtctttcgggggagtccgtctacctgcctgcgggtacaagtcgatcccgggtgctgaactgcattcgatacccagtaaaatagaaaatcaaatatttatattcaacagcttcaaatgataacattcataaatgtgcgaattttaaattagttatcttgttagctgctaggctcaacctttgaacatatatggctgatataaaatcgatgaaatgcaatgatttattcacttatctaacctacttctaagcgagcccaatatgccctgccgaaattgcaagcaggtggcatggaaatgttgcaaggaggcattgaagcgtaagtcggtgataatcacggcaagccgacgccttaacacgtaaccgtgacgtcaaatgccacgacacggtccaagtcaaagccaaaggcgattacactgaaagataatatacttgacataaattaaagacaaaaatctagccagatcagcatacgattattttgtataccagcctttgaagatacaatccatttctttttctcttttgcatttcacaatgatttctctgagtgtagaattgcaacagcatcagcaggacgcagtcattgtcattgcccccaacccgtccccaccgcacagtgccgcctcctgcagccagtgaaaattgcaggataatcacagcaacttgagttctcaagtgcatggcggggggaaaaaaggcggaaagaatggtgcatggcaaggggaaaggtcggtggttggggggaagtctgactctgtttatgcgtggtaagccaattttgatatgaagccctagtccaaaaaataaacgtaaggaaaagcgagagccattgttaaagtgcatgaagagatttattgaaggatgggatcgggagctggaggacttc

PCR verification status

Line verified as correct.

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