| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT17013 | chr2R 11016930–11019079 (2149 bp) | chn, Rpb12 |
      active |
procephalic ectoderm AISN, posterior endoderm anlage, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 3 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | apically cleared | 3 |
| 7-8 | ubiquitous | 3 |
| 7-8 | posterior endoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 9-10 | lateral epidermis anlage subset | 3 |
| 9-10 | head epidermis lateral anlage | 4 |
| 9-10 | ubiquitous | 2 |
| 9-10 | ventral epidermis anlage broad | 4 |
| 9-10 | head epidermis ventral anlage | 4 |
| 9-10 | head epidermis dorsal anlage | 4 |
| 9-10 | dorsal epidermis anlage subset | 3 |
| 11-12 | ubiquitous | 2 |
| 11-12 | brain primordium subset | 4 |
| 11-12 | ventral epidermis primordium subset | 4 |
| 11-12 | head epidermis primordium subset | 4 |
| 13-14 | brain subset | 4 |
| 15-16 | brain subset | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0015371 | chn | overlapping | BDGP FlyBase iFly |
| FBgn0262954 | Rpb12 | 15543bp upstream | BDGP FlyBase |
| FBgn0033993 | CG8089 | 16400bp upstream | BDGP FlyBase |
| FBgn0033994 | CG7544 | 18435bp upstream | BDGP FlyBase |
| FBgn0013467 | igl | 26012bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ccactccaacgccccacaataaaaaaaagacagaaagagcagtgggcacccctttcctgaaaaatgagaccaaagatcccaaatgcgacgccgcgaggggctcaaaaagaaaagaaatcgaaagaaacccaccaccaatccttgctcatactccccctcctccgccaccttcgcctcctttgcctcctccctcattatcctactttcttcgctgccctgcttatcatcttcgcagacacacacacacgcacacagcgagaaatcatgcctgccttcttctattcgttctgccttgtcacatgttcctcttcctttccctttcaccctgttgcgcgcaggagaaggaaaaaaccgtggtgtgggtagggaaggggagggaggcgactgaccgtcgcgacgcccgctgtttcaaatggtgatttcttgtaggttctcattttggcgtggctcttgtcccctttccttccccgctgctttatcacttcgtctgtctctcccacactctccctttgcattctgatgaattttttacacccacccatcgatagcgacttttgcattcaacctactccgcctccttccctctcatttccacttctcgctgtgttgccgcccccactgacagtcgccctctattatttgcttgttcattatggactcatcttcgtggtttgctcgccttcgaaggagttgtcattggaacgatcggttgggaaaaagggttgccgttggaaaacgtcatgttcccgtggggagatggaaacgaacacacacgcaataaaacataattccataatttaatcacaaatgtacatatattagtaaatttaactttatagtgaattataaatacttgttgatatggaaagcgaaaaatttacttctatattttttaaattcagtttaaactgaaaacttcaaacctgcaaatttggcttcggttctgtctaaataatcaagtttcaaatcaaacatttaatttttctgtgaaatgctctttctgaaagatccgctttctgcaaaatcaaataaaaagttataaatacttgttgataatgtggggagttgtggaacttaagtttctagaactctaccgtattgagtcatctgccatcttacttctgcgtccgctgcacggaccccccgcttgttatgttactgccaacccacgcttggcttcctccccccgccactcaacttcgacattcccatggaaaaagcgaccccaaaaaaaagggcaaaaataaattacgcacttcccgtcgtcggtggtagagcaattttatgcagccaggggagggagggtgaaaagaggggttgcgccgccgatggatggtacctgcccgtgtcgcaaagagggttgttgtgctgcaccgatcccgataccgatcccaatcccaatccctaaaccgatcctatgccgatgcctatgcccatgcgatacgacgatggtgatgcgaccccagtgaggcagcaatctcaccgaaaatcacataggaatttcctgttacacccgccccctgcccgaaagttacctgccctcgtctccgcgctcctcgtttacctgttttctccctcccgctctctgcagcagctgtttgttttgcggctttcaaggtttctactttttacctgttggcgtcagtcggttcagttcgattgggattttgaatcggattcggcatcggagttcgtcccctttcgcagcacagccaccccattgcgtaggattcaatccacttcttatgtgtatgtacatttctcacttctttgttcgctttgggtgggtggggtgtacctaccaggtgggaggggggagacttactcacatcttcttctccatttcttttgttggcccaaaagcgggcagagtcgatccaaaccgaaccgaaccgaaaatcttttgggcgtcttgagttttggttggtctcgtttttgcttttgtgcccggcgatcatcattatcttcgtttcgctggctcattctatggcaccaccaccaccaccaacaccgccaccagccactcctcctactacaatttgcctaaaaaaccccaaccgtttcgaccgtttttcaatattcaacgaaaccaaccaaaataaaaaaataagaagaaactcagaaaatgatggtggcgaagaggaagagca
PCR verification status
Line verified as correct.