Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT17124 chr2R 11242471–11244626 (2155 bp) unc-5, Pms2 activityactivityactivityactivityactivityactivity
active
tracheal system anlage, tracheal system primordium broad, head epidermis dorsal primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8ventral ectoderm anlage2
7-8procephalic ectoderm anlage2
9-10lateral epidermis anlage subset3
9-10ventral epidermis anlage subset3
9-10head epidermis lateral anlage3
9-10tracheal system anlage4
9-10head epidermis dorsal anlage3
11-12head subset3
11-12tracheal system primordium broad4
11-12ventral epidermis primordium subset3
11-12head epidermis dorsal primordium subset4
13-14head subset3
13-14tracheal system broad3
13-14head epidermis dorsal subset3
15-16head subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0034013unc-5overlapping BDGP FlyBase iFly
FBgn0011660Pms213108bp upstream BDGP FlyBase
FBgn0034012Hr5115583bp downstream BDGP FlyBase iFly
FBgn0265651CR4445816729bp upstream BDGP FlyBase
FBgn0265652CR4445917079bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gtaatttggctaagcagcccggcaaacaatgtggcccaatatcggcctcgtcaaacaaaggtctagacaaatcgaaaacaaaacgaacttcaatatcccatctataattgaatgcacacacaaaacaaagcggatagagttggaagactattataatctggtcagttacatgagcaccgcccgcccacacactccatatccacaaatatagcagatatgagatagcacatagtatatatggcatatatggcatttaccattactattaccccaacccatccacacacaaaggagaatattgacagacactcaagtgtccacaagcaccctgtaaatccaattgaattacgcataaaggcgcttaagccgaacgaaacgagtctctcgatgatgacgacccatcaaatgtatgatttccctttaacttctgattacccgatattttattacgtttcgtggtcacgccggctactgggtaccactgatttggtgtagctatggagctgtggcgcatggatcccccaataataatcacttatcgcatatcagcgtttccgcaaaatttacatatcgacttttacttgatgcgccttttaatggcccacgtcgacggcaataaaatattgagagactgagcgtgcgggggcctttgagttttaacttatgcatgattaatacataattacaaagacaaacgcataaactccaactcaaactccagctctaagtgaggcccaaagaggggggccggacttatcgcggtattcgtgcaggtatgcctcctccatataaccatttgccactccaacgtccaccacaccaccacttaataactctaaaagacaaaaggcacttttcccacagccaaaggcaaaggcaaaggcaaagcccgtggaggagaccacgtcctgaaccgagccaagctgcctaggtgcccggagaactgcagtgtggcggagcatacttatacctgttattaatatttcgattaggtaccaacgattcgtagaacctgacgcatgacttgcatggctaatgggaaattttgtaacttgtgaccacgctgccctacaatttgtgggtcgtcggacggggtcgtcggattggtcccctgattgatggagacaactcatcgattgtgcggcgaggacaggaagtgtccctaagtgcagccgatacatcctcattttcccatagatcctgacagtagattggaatctgggcctaccttcgccaggaaatgatatctaaactcatgcgtacaactcgagatagtttcattcgtgaaaggagcatattttttgaccttttggaagggtttgttgcgtgatcatttcatcttctcttcgcagacaccacccttaaaatattgttgattctgggaaatgtgattgtaagcagacacctttttcttccttactcataaagaggatttgcgtcataaaaaagcaggtgtacatctgagggttccattaaatgtttgaataacactgtaataggatatgcagcctaaatacagatacaggttagcaatatctacaacaaaatgtaacatgatgtttaggttaggttctataatgaatgaattcaatataaattcactgaacagcagatttcttaggcaatagagtgtgtactagtcgtctcagatagcaaaatccaagtgcaagaccataagtttgttaatgctgagcgtgtgcgtcaaagatatgaacagtttagtcaaaccgtggacactttcgtggcttgacagaccgctttgtaaataatcgccttatggccaagtgcgcaaattgcctggtcgaaggagcaaaagtaaatgtagctaactggcgtttcttatctgactttccagatcgtattcaccacgtgaacaaagcgagtgtgcggctaatgctaatgccagctccttcagctagctcgccacatcgccagcagcagcaacaacaattgcaggtgcccctgcaggtgcatcagttgcacaggaagcgccggacaaagggacacctacaccaccttcaccatctcaaccacgaaacgacaggtcaactgacagcgaagcatggcggtgattaataaagccggaaatgtgattgccctcctgctggttaagcttcagctaatcctgctgttcacgctgtcagtttccggagagt

PCR verification status

Line verified as correct.

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