| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT17205 | chr2R 11416053–11418320 (2267 bp) | Khc-73, CG30471 |
      active |
A-P stripes, anterior endoderm AISN, ubiquitous | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ubiquitous | 2 |
| 4-6 | A-P stripes | 3 |
| 4-6 | posterior endoderm AISN | 2 |
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 7-8 | anterior endoderm anlage | 2 |
| 9-10 | brain anlage subset | 1 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | brain primordium broad | 2 |
| 11-12 | ventral nerve cord primordium broad | 1 |
| 13-14 | brain broad | 2 |
| 13-14 | ventral nerve cord broad | 1 |
| 15-16 | ubiquitous | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0019968 | Khc-73 | overlapping | BDGP FlyBase |
| FBgn0050471 | CG30471 | 4972bp upstream | BDGP FlyBase |
| FBgn0050467 | CG30467 | 9627bp upstream | BDGP FlyBase |
| FBgn0034027 | CG8187 | 11006bp upstream | BDGP FlyBase |
| FBgn0022097 | Vha36-1 | 12887bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
acacacacaagtcgggatggaatggttgggctaaaagtataggtatatacatatatatatctatgtacagccgtatcctggtgtgctgcctggcctttggaacttccgttccggtttatgttacaaagccgagaacgtgacatgacatggaaatgaaagccgcaaaggactcaggagcaacgagctgaccctaccggctggtggctacgggctacatgtcttgttcaaagtctcgaatgtgacgaaggcgtgccataaattatttgatggtctcatttgtagttctggtcagttgatttgatggcgagttcgtataacctcaaacggttttcacttcgctattgtccagcgctgaaattaacatacatatactccgcatacactggcatagtgaaaacaggttaagctttttggtaagaagtaaagagctgtgacttcatttcgagcttgtttcgccgcctgacttttcagctgcctttgccgtgtctttgcgtttgaaattgccttttctgttttcattttacgctctgctggccagctcaacgcggagaggtcaccagttacggacatggcccaaatacactgttgactaatgccagtcactgcaagtgtgtaacacgctgggtatcgcaaaatacaagcctttatcagcccagtgataacgattctgcgttgcttatcgcagactttccggtgactacgactactactctcttcagacaccaaaacagcaacggatcaaacaagccaaaaacatgacaaagtacaacatcgatacacggtcaaacttctaaaaatacacgcggttaccaagtccatgcgtacgcctaacttggccggaaaatattacaagtgacacattatgatggataaccagaagtagttgtttgtttgccaataaacaagtatatacaagtgttacggatacaattaattagtttcacaagtagctggcactagcgtggtaataaatttgtcaaaattacaaagttatttgtaattaaatgagcatctgtgatcgcagaattcatcactttaaggtcccatagctactaagactagtttgtgtttcatttgcaaatacttgcaagtgcacaattattgcactatgctccacaacgactacctctaaaaccagaatgcaattgcaattatcctaattcatccattagcttcgctatagataaagacctaataggttagagtccatctaatcgagttatgacaaactgagtatgaaaagaaaagctacaaaataacaacagaaatgtgttttgatggattatacaatcatgtaaatataaacaaacatggagtcatcggtgtaggtttgtcattcaatcaattaggatcgtgacccatataaatggaatactttctaagcctgccgtttgtttatatgtgtatgaaatcaaactttacgttatgccaatttataaacagagggtgcaccaaaatgcaataaatgtaactgattcaatgccttatgtaaatataaataagatgtgcaatcaaagtttgccattcaatcaatacagcaggggatccaagtggaccttgccccacgcacaggcacataaatacaagcatgcagcacgcttatatgcgtttacataggtatcttttgcatatggttgggtcgtagagccccttttccgctgccatccttcgcttccgccgacgccgccgcgagtgtgagtcatggatgagccaaatgaatgatcagtgttgacattggaaacgctgacggcgctgttgcttgtttttcatttttagttattttgcacttgcaacacacttcgtggctggcagtgggtaacgcgaaattagctggaaacgcaaatcgtttgtcagacgagcagaccggggaccttgcaaaaccatcccaatccatcccatcccattaccatcccgtaggtagacgctgtagttctgcagttaagccctgcgaaaaatccgctggcgcagcagttgaaaaacgaaaccgtatttcaaaggaagcgaggaagcccatgtaaatttcgttagcctaaaaaaacagtcgcttgcctggttggttgtttgcattattgattgcaggcaactgcagtgcttgttggccattgttgggaaacaatgtgaaaaagtggggaaaatggaaagtgcgggccactcaaggcaactccttatgaactatattatcaactcttacaaaataaatggagtgcctggcatctgatgttataattttatagaaattgcttaaccaccctcacgaccaaccgtaaa
PCR verification status
Line verified as correct.