| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT17405 | chr2R 11778015–11780146 (2131 bp) | sli, CG33463 |
      active |
head subset, lateral epidermis primordium subset, ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | lateral epidermis primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | brain broad | 1 |
| 13-14 | ventral nerve cord broad | 1 |
| 13-14 | midgut subset | 1 |
| 15-16 | head subset | 2 |
| 15-16 | midgut chamber | 1 |
| 15-16 | brain broad | 1 |
| 15-16 | ventral nerve cord broad | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0264089 | sli | overlapping | BDGP FlyBase |
| FBgn0053463 | CG33463 | 5319bp upstream | BDGP FlyBase |
| FBgn0050085 | Rif1 | 21364bp downstream | BDGP FlyBase |
| FBgn0265511 | CR44373 | 25485bp upstream | BDGP FlyBase |
| FBgn0022160 | Gpo-1 | 27756bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
catggcgcaggagtagcaggatgggtagtatcagtagccgcagctggagccggaagggtggtggcatcaacgtcgtcctggacggcgcggccattgtggcacatttatgaagcagcggcaacgtgcctaattgaaagtggcccccgtatatgccaatccactttgtcaacagcaatcaccactgggtaaatatttgagggagaaaggataaaggattgatgatgcgttcgcaggcactttcacttcactgatttcactggattaatcctttcgattcgatatcgagttcgaggcgttttgggttcggtgaatgtccgcccgcgctccacggcgcacttttcactcggggttttcctacggcggtacgctcttttgcagccgtcgcgaacgcgcttcttgaccaaactgagcggaccggctgagcagatgtctgtctgtccgtcgagcgctcgacaaaagtatcgagtaccgagcagcgagtagcaagcagcgagagagtatcggcggcgagttactctctttttcaactccctaccgaaatcgtaggtagaatccggctatgtaggtagaacggcacgcacaagttaggtagcaggaaatgcacttttcctttcctttgtctcgggtatctcgtatctggtatctttcggatactgcacttggctgtcagcagctaaagcatcggaccgggagcggcagcaacttcatcatcatcatcagcaccggcggcagcaccagctcgaaggcatcgcagcgacctgctgagcgcatctgcaacgagattgggaaagaagaatgtgtcggtaaaatcatgaaaaattatctataaattcggcaaggcatcgcagcggcaacagcaggaaattgccattgactgagcgtttaaatataaacctatacgctttacgatgtatatttattttacttaaaacttaaaatatatacacacgaggaagttgagtggcagaagttggatgaacgaacatacatacatataaaactcaactgtcgtctgtaacgccatgatatattgcctggccacaaattagctcgtcttttttattttcaatgaaaaaaaaaaagaaaaccatccctcgaaacacctgtcggattgagcggtagcaactaccactaatcaccttcagaaaactacaattatcagttgtttgaatagcatatggtatgtttttcctggggaaaactccctatcaacaagtaaacatgggaattttaagaaaagagttttcgtttggataaacattttattttgaatgagtgtattcctgtaacgttttagttacttttgatcataaccaataagtctaataattacatgaatctaaaagttctcttacaaacccaaaattacattccacattgtagagaaaaattgatatggaaataagagtgttctttgacctcgttttccatttacaatgagtatattgccctaacctaccatagaagtgaggaactatgctatctggaagctcatctagtaattactcgcatctgtaatctctgggcttccgctgttcgattcctcgggggaactcacaaatcatatttaagagcactctggcccaattaaatctctgggttcttctaatgacccttcttctccgccaccacccgccgttccttctatccgctcaagtgccagtcttcatatatgtacatacattccccaggctaacactattcagattcgatctatatttggccatctcgctatctctttcgctcgctatcgtggcatctctttcgctgctggtctgtcatgttgtgtacttaatttgcaaattgacatgttaaggcactccataccgctcgctcgcttgcttgcttctgatattaattgtttaaattaacatttggataaatgacagccgcgattgattctgaatgcaggaggcatattcagttattggataactggagtaatcagcgttggactgtcaaaaatcgctttcgccgagatatatcttcctctgtttcacttaactggcaatcaacttaaactcaattgaatgtcaaacgtaatttgagcaagctttccatacaaacggaatgcacattatacacacatgaaaaagtacgagtagagaacctatcaagaccaggcatggggg
PCR verification status
Line was not verified.